| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2476 |
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| Symbol | |
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| ID | 7401528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2454182 |
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| End bp | 2455147 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709548 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_002567119 |
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| Protein GI | 222480882 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGACA AGACGCAGGT TGCCCGAGGA AAGCGGATCC AGCGTCGGAC CGGGAAGACG
TTCCACGTCG CGACCCGGCT GCTCCCGGAG CGGATCCGGC ACCCGACGTA CGTGCTGTAC
GGCTTCTTCC GTGTCGCCGA CGAGGTCGTC GACGCTGCGG AGACTGCGCC GCCAGACGAA
CAGCGGGCGG AGCTCGATCG ACTCCGTCGG GCCGCGCTGG CTGAGAGAGA CACCGACGAC
CCAGTGTTGG AGGCGTTCGC CGCGGTCTGT GACGAACACG AGATCCCGGA CGAAGACGTG
CACGCGTTCG TCGACGCGAT GGCGAGCGAC ATCGAAACCG ACCGGTACGA GACCTACGAC
CAGCTTGAGT CGTACATGGA CGGCTCCGCG GCCGCCGTCG GCCGGATGAT GACGGCGATC
ATGGAGCTCG ACGAGGAGGC CGAGGTGAAG GCGCTCCCCC ACGCGACGAA GCTCGGCGAG
GCGTTTCAGA TGACGAATTT CATCCGCGAC GTGCGTGAGG ACGTGGCCGA ACGCGACCGG
GTCTACCTCC CGCTGGAAAC ACTTCGGCGG CACGGCGTGA GCGAGGATCA GATCCTGAAT
CTGGAGTTCG ACGACGACGT GGCGGCAGCG ATCCGCGAGG AACTCGTCCG GACCGAGCGG
CTCTACGAGG AGGGCGTCGC CGGGATCAAG TACCTCCCGG AGGACTGCCA GCTCGCGGTG
TTGCTCGCGG CGGTGCTGTA CGCGGACCAC CATCGGCTGA TCCGCGATCT GGGGTACGAC
ACGGTGTCGA CGACGCCGGA ACTGTCGTTC GTCCGCAAGA TCTCGCTGCT CGTCCGGACC
CGCTGGAAGT GGCAGTGGAA CAGAGACCCC GAAGCGGTGT TTTACGAGAT GTGCGGCGGC
TTCGACGCCG CCCGCGAACA CCGCGAACAC GGATCGCACG GACCGGGTAT CGCCCAGTCC
GACTGA
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| Protein sequence | MVDKTQVARG KRIQRRTGKT FHVATRLLPE RIRHPTYVLY GFFRVADEVV DAAETAPPDE
QRAELDRLRR AALAERDTDD PVLEAFAAVC DEHEIPDEDV HAFVDAMASD IETDRYETYD
QLESYMDGSA AAVGRMMTAI MELDEEAEVK ALPHATKLGE AFQMTNFIRD VREDVAERDR
VYLPLETLRR HGVSEDQILN LEFDDDVAAA IREELVRTER LYEEGVAGIK YLPEDCQLAV
LLAAVLYADH HRLIRDLGYD TVSTTPELSF VRKISLLVRT RWKWQWNRDP EAVFYEMCGG
FDAAREHREH GSHGPGIAQS D
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