Gene Hlac_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2427 
Symbolrpl15p 
ID7400545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2416211 
End bp2416708 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID643709500 
Product50S ribosomal protein L15P 
Protein accessionYP_002567072 
Protein GI222480835 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA AGAAACGTCG ACAGCGCGGT TCTCGCACGC ACGGCGGCGG AACGCATAAG 
AACCGGCGCG GTGCCGGTCA CCGCGGCGGT CGCGGTGCGG CCGGTCGCGC GAAACACGAG
TTCCACAACT ACGGCCCGCT CGGCAAGTAC GGATTCAAAC GACCCGAGAG TGCGCAGACC
GAGGTCCTCG AGGTCACCGT CCAGAAGCTC GACGAGGATG CGGCGCTGTA CGCCGCAGAC
GATCTCGCCG AGGAAGACGG CGACGCGTAC GTCATCGACG CACGCGACGT CGTCGAGGAC
GGCTACGAAG CCGATGTCGT GAAGGTACTC GGCGGCGGAC AGGTCCGCCG CGAGCTCCGC
GTCACCGCCG ACGCGTTCAC CGCCGGTGCG GTCGAACTTA TCGAGGAGGC TGGCGGCGAG
GCGACACTCT CTGAGCGCGC CGAGGAAGCC GCTGACGAAT CGGAAAACAC TTCCGACGAC
GAGGACGACG AGGCGTAA
 
Protein sequence
MTNKKRRQRG SRTHGGGTHK NRRGAGHRGG RGAAGRAKHE FHNYGPLGKY GFKRPESAQT 
EVLEVTVQKL DEDAALYAAD DLAEEDGDAY VIDARDVVED GYEADVVKVL GGGQVRRELR
VTADAFTAGA VELIEEAGGE ATLSERAEEA ADESENTSDD EDDEA