Gene Hlac_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2418 
Symbol 
ID7400536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2408047 
End bp2408694 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID643709491 
Productprotein of unknown function DUF1641 
Protein accessionYP_002567063 
Protein GI222480826 
COG category[S] Function unknown 
COG ID[COG2427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.784703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTG ACGACCCCGA AAGCGGAGGA GAGGATCTCG ACCGCGACGA CCTCGAATCG 
ATCGTCGCCG AGAATCCAGA GGCGGTCGCG ACGTTCATCG ACCGGCTCGA TGCGGTCAAC
GAGTTCCTCG ACGTGGTTGC ACTCGGTGAG GGCGCGCTCA CCGACGAGAT GGTCGTCGAA
CTCGCGGGCA CGGCCTCGAC GCTCGCGGAA TCGGCGGACG GGCTCGCGAC CGACGAGACC
GTGGCACTCG CCGAGACCGT CGGCGGGAAC GGCGCGGAGC TTCGCGAGGC GATGGAGACG
CTGATCGCGC TTCAGCGAAG CGGGACGCTG GACGAGCTCG CGGAGGTCGC GGAAGTGGGA
TCGCTCGCAA CCGCCGCGCT CGACGACGAG ATGGTCCGCT CGCTGGCCGG AACGGGCTCC
GCGCTCGGCG AGGTGGCAGA CACCGCCGCG GACGACGACA CCCGCGATGG GCTGAAGACG
CTGTTGGCGG GGGTCGGCGC CGCCCAACGG AGCGATCCGG AATCAGTGGG CGCACTTGGG
CTCGCGCGGG GGATCCGCGA TCCGGAGGTC CAGTACGGGC TCGGCTACGT GCTCGCGATC
TCGAAGGCGA TCGGGCGAGA ACGCGCGGAG ACCGACGACG ACGTGTGA
 
Protein sequence
MTGDDPESGG EDLDRDDLES IVAENPEAVA TFIDRLDAVN EFLDVVALGE GALTDEMVVE 
LAGTASTLAE SADGLATDET VALAETVGGN GAELREAMET LIALQRSGTL DELAEVAEVG
SLATAALDDE MVRSLAGTGS ALGEVADTAA DDDTRDGLKT LLAGVGAAQR SDPESVGALG
LARGIRDPEV QYGLGYVLAI SKAIGRERAE TDDDV