| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2404 |
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| Symbol | |
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| ID | 7400522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2395621 |
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| End bp | 2397567 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643709477 |
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| Product | phosphoesterase RecJ domain protein |
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| Protein accession | YP_002567049 |
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| Protein GI | 222480812 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1107] Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA ACACCGCCGG GGATTCCGGC ACGCGGGGCG ATTCGAGCCC CGAACCCGAC
GCCGACACGG CGGAGGGGGC GGCTGACGAC CGGCCGACTG TCTACGATCT GGCATCGGAC
TGCACCCTTG AAGACGCCGA AGTCGATGCG CTGTACCACG CTGAAGTCAA CTGCGTCGTC
GACTACGGCA TCTTCGTCGA CGTCTCGGAC GCCCTCTCGG GGCTCGTCCA CGAGTCGAAT
CTCGACGGTG ACTACGCCGT CGGCGACCGA CTGGTGGTCC GGCTGACCGA GGTGAAGGAG
AACGGCGACG TGGCGTTCGA CGACGAGAAC CTCGACGACT ACCGCACGGA GACGGTCGTC
CACGAGCCGA CCGTCTCCCG CGTCCGCGGG CTCACGCCCG GCGACGAGGT CACCGTCGAA
GGAGAGGTCG TGCAGGCGAA ACAGACAGGT GGGCCGACGA TCTTCGCCGT CGCGGACGCC
TCCGGCGTCG TCTCGTGTGC CGCCTTCGAG GAGGCCGGCG TCCGCGCGTA CCCCGAGGTC
GAGGTCGGCG ACATGGTCCA CGTCAGCGGG ACGGTTGAGA CCCGCGAGAA CGCTCTCCAG
CTGGAGGTCG ACTCGCTGAA GCGGCTCCCC GAGGGGCGAG CGGCCGAAGC CCGCGAGCGC
TTCGAGGCGG CTCTCGACGA GCGCGCCGAG CCCGCCGACG TCGACCCGCT CGTCGAGTGG
GAGGCGTTCG AGCCGATCCA CGACGACCTC CGGGAACTGG CGCGGCTGCT CCGCCGCACC
GTGCTCGCCG GCCGTCCGAT CCGCGTCCGA CACCACGCCG ACGGCGACGG GATGTGTGCC
GCGATCCCAG TCCAGCTCGC CTTGGAGAAC TTCGTCTGCG ATGTCCACGA GGACCCGGAC
GCGGCCCAAC ACCTGTTCAA GCGGCTCCCG AGCAAGGCGC CGTACTACGA GATGGAGGAC
GTGACCCGCG ATCTGAACTT CGCGCTGGAG GGGCGTGCCC GCCACGGCCA GAAGCTCCCC
TTCCTACTGA TGCTCGACAA CGGTTCGACC GAGGAGGACG TGCCCGCCTA CGAGAACCTC
GCGCACTACG ACATCCCCAT CGCAGTCGTC GACCACCACC ACCCCGATCC CGAGGCCGTC
GAACCGCTCC TCGACGCCCA CGTCAACCCG TACCTCCACG ACGAGGATTA CCGAGTCACC
ACGGGGATGA TGTGCGTCGA ACTCGCCCGG CTGATCGACC CGTCGATCAC GGGCGAACTC
GAACACGTCC CGGCGGTCGC CGGGCTCTCC GACCGCTCGA AGGCGGAGAC GATGGACGAC
TACGTCGCGC TCGCCGAGGG CGCCGGCTAC GACGAGTCCG ACCTGCTCGA CATCGGCGAA
GCGCTCGACT ACGCCGCCCA CTGGCTGCGC TACTCCGAGG GGAAGACCCT CGTCAACGAC
GCCCTCAACG TGGGCTGTGA GGACGAAGCA CGCCACGAGG AGCTGGTCGA GTTCCTCTCC
GAGCGAGCCG ACCGCGACGT GCAACGCCAG CTCGACGCCG TCGACGACCA CGTCGAACAC
GAGCGGCTCG CCTCCGGCGC GCACCTCTAC CGCATCGACC TCGACGAGTA CGCCCACCGG
TTCACCTACC CCGCGCCCGG GAAGACGACC GGCGAGCTCC ACGACACTCG CGTCAAGGAA
ACCGGTGACC CCGTCATCAC CATCGGCTAC GGTCCCGATT TCTGCGTGCT TCGCTCCGAT
GGCGTTCGGC TCGACATCCC GAACATGGTG ACCGAACTGA ACGAGGAACT TCCCGAAGCG
GGCGTCTCGG GCGGCGGTCA CCTCGTCGTC GGTTCGATCA AGTTCGTGAA GGGCCGCCGT
AGCGCCGTTA TCGAGACGCT CGTCGAGAAG ATGGCCGACG CGGAGATCGA CGAGGCGCTC
TCGTCGACGG TCGCGATCGA CGACTGA
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| Protein sequence | MSDNTAGDSG TRGDSSPEPD ADTAEGAADD RPTVYDLASD CTLEDAEVDA LYHAEVNCVV
DYGIFVDVSD ALSGLVHESN LDGDYAVGDR LVVRLTEVKE NGDVAFDDEN LDDYRTETVV
HEPTVSRVRG LTPGDEVTVE GEVVQAKQTG GPTIFAVADA SGVVSCAAFE EAGVRAYPEV
EVGDMVHVSG TVETRENALQ LEVDSLKRLP EGRAAEARER FEAALDERAE PADVDPLVEW
EAFEPIHDDL RELARLLRRT VLAGRPIRVR HHADGDGMCA AIPVQLALEN FVCDVHEDPD
AAQHLFKRLP SKAPYYEMED VTRDLNFALE GRARHGQKLP FLLMLDNGST EEDVPAYENL
AHYDIPIAVV DHHHPDPEAV EPLLDAHVNP YLHDEDYRVT TGMMCVELAR LIDPSITGEL
EHVPAVAGLS DRSKAETMDD YVALAEGAGY DESDLLDIGE ALDYAAHWLR YSEGKTLVND
ALNVGCEDEA RHEELVEFLS ERADRDVQRQ LDAVDDHVEH ERLASGAHLY RIDLDEYAHR
FTYPAPGKTT GELHDTRVKE TGDPVITIGY GPDFCVLRSD GVRLDIPNMV TELNEELPEA
GVSGGGHLVV GSIKFVKGRR SAVIETLVEK MADAEIDEAL SSTVAIDD
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