Gene Hlac_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2277 
Symbol 
ID7399987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2265636 
End bp2265941 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content66% 
IMG OID643709350 
Product50S ribosomal protein L21e 
Protein accessionYP_002566923 
Protein GI222480686 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.644218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.149575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA CCATGCCGAG TTCCAATGGG CCTCAGAAGG CGACCCGCGA CAAGCTCTCG 
AACAAACCCC GCGACCGCGG CACGTCGCCG CCACAGCGAG CGATTCAGGA GTTCGACGAG
GGATCGCAGG TCCACCTCAA GATCGACCCG AGCGTCCAGA AGGGCCGCTT CCACCCGCGC
TTCGACGGCC GCACCGGCAC AGTGCTGGGC AAGCAGGGCG CCGCGTTCAA AGTCGAGATC
CCGGACGGCG GCAAGACGAA GACGCTCATC GTCACCGCCG CCCACATGAG CGCACAGCAG
AACTGA
 
Protein sequence
MPKTMPSSNG PQKATRDKLS NKPRDRGTSP PQRAIQEFDE GSQVHLKIDP SVQKGRFHPR 
FDGRTGTVLG KQGAAFKVEI PDGGKTKTLI VTAAHMSAQQ N