| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2258 |
|---|
| Symbol | |
|---|
| ID | 7399968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2246362 |
|---|
| End bp | 2246970 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643709331 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566904 |
|---|
| Protein GI | 222480667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0144555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTAC TTCCCGACGC TGTCCGCGAC GCCGACAGCG TGCTCGTCAC CGGGCCGCCG
ATGAGCGGGA AGTATGATCT GTTCAACCGA CTGCTCGCCG AGTGGTCGAC CGGGCCGGTC
GTCATCTCTA CCGGCCGTAC CGCGGAGAAG ATCCGACAGG ATTACGAGAC GATCACCGGC
CGTGACGGCG ACGACGTGAT CGTCATCGAC TGCATCACCC ACGAGCAGGG CGATAAACGC
GACGACACGC CGACGACGAA GTACGTCGCC AGCGCTGGCA ACCTTACCGA TATCGGGATC
AAGTTCACCG ACGTCGTCGA GTCCTCGGCC GGCCGCGACC GCGCCGTCGG CGTCTACTCG
CTGTCCCAGC TATTGATGTA CTGGGATCCG GAGCGGATCT ACCGGTTCAC TCGCGTCATG
ACCTCCCAGA CGTCCGGGGA GGGATGGCCG TTCGTCGGCG TGGTCAACTC GGCCGCCCAC
GACGAGCAGG TGGTCAATAC CCTCCACGAG CCGTTCGACG TGGTCGTCGA GACCCGCGTC
GAGGGAGACG ACCGAGAGTT CCGCGTCCGC GGCCGGGTCG GGAAGCCCTC CGAATGGACC
GCGTTCTAG
|
|---|
| Protein sequence | MTVLPDAVRD ADSVLVTGPP MSGKYDLFNR LLAEWSTGPV VISTGRTAEK IRQDYETITG
RDGDDVIVID CITHEQGDKR DDTPTTKYVA SAGNLTDIGI KFTDVVESSA GRDRAVGVYS
LSQLLMYWDP ERIYRFTRVM TSQTSGEGWP FVGVVNSAAH DEQVVNTLHE PFDVVVETRV
EGDDREFRVR GRVGKPSEWT AF
|
|---|
| |