Gene Hlac_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2246 
Symbol 
ID7399956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2235632 
End bp2236264 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID643709320 
Producthypothetical protein 
Protein accessionYP_002566893 
Protein GI222480656 
COG category[R] General function prediction only 
COG ID[COG1645] Uncharacterized Zn-finger containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.14566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GGTTTGACAA GGAGGCCGAA CGCGAGAAGC TCCGCGAGAA GCTCGCGGAC 
GACGACGAGA AGCGCGAACA CACCCAGCGG ATGTCCGAGC TACTGTTGCA GGGAGCGACG
ATGACGAACC GCCACTGCGA CGACTGCGGC GATCCCATCT TCCGCCACGA CGGGCAGGAG
TTCTGCCCGT CGTGTCAGGC GATCGGCTCG GGCGACGGCG CGCGGGGCGA GTCGCAGGAG
AGTGCGCAGA CCGCGGCGCT GGAAGAGGCG GGGAACGCGC CCCGAACAGT CGTGAAGACC
GGGGACAGCG ATGAGAGCCC GCCGCAGAAA GAGCGAGACG CGTCGGAGTC CCCGGCTGCG
GATCAGTCGG CTCCCGCGAG CGCGAGTCAG AACTCCGCCA CCTCGAACGC GGTCTCACCC
CAGCCGACCA CCGAGAAATC GCGTGACGAT CCGACGACGA CCCCGCCAGC CGAGTCCGCC
GGATCGGAGA CCGTCGCCGA CGCCCGCGCG TCGCTGACGC GGACGCTGGC GCGGTTCGCC
CGCGCGGCCG AGGAGACGGA CGACCCGCGA CGCGCTCGCG ACCACCTGCA GGCGGCGCGC
GAGGCGGCGG AGGCGCTGGC GGCGCTGGAC TGA
 
Protein sequence
MSDGFDKEAE REKLREKLAD DDEKREHTQR MSELLLQGAT MTNRHCDDCG DPIFRHDGQE 
FCPSCQAIGS GDGARGESQE SAQTAALEEA GNAPRTVVKT GDSDESPPQK ERDASESPAA
DQSAPASASQ NSATSNAVSP QPTTEKSRDD PTTTPPAESA GSETVADARA SLTRTLARFA
RAAEETDDPR RARDHLQAAR EAAEALAALD