Gene Hlac_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2221 
Symbol 
ID7401156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2205176 
End bp2205583 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID643709293 
ProductDoxX family protein 
Protein accessionYP_002566868 
Protein GI222480631 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.631105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGAAACCAC GGAGGAGACG GAGCGGATCG ACCGCGGCGC GCCCTCGCGG 
ATCGGCCGCG TCCTGCTCGG AGTCGGCCTC GCCGCGCAGG CCTCGGAGGA CTTCCGCGAC
ATGGAGGACA CGATCGAGTA CGCGGAGTCG GCGGGGGTGC CGGAGCCCGA CCTCGCGGCC
CCGTTCGCAT CCGGGATGAT GGTGGCCGCG GGCGTCGGTA TCGCCCTCTG GCGGCTCCCG
CGAGTCGCGA CCGGTGCGGC CGTCGCCTTC CTAACGGTGG TGACGGCGAC GATGCACGAC
TTCTGGAACG CCGACGAGGA CGACAAAAGC GGCGAGCGGC TCGCCTTCTT CGGCAACCTC
GCGATGTTAG GCGGTGCGCT CGTGTTCCTC CGGGAGGCGT TCAAGTGA
 
Protein sequence
MSDDETTEET ERIDRGAPSR IGRVLLGVGL AAQASEDFRD MEDTIEYAES AGVPEPDLAA 
PFASGMMVAA GVGIALWRLP RVATGAAVAF LTVVTATMHD FWNADEDDKS GERLAFFGNL
AMLGGALVFL REAFK