Gene Hlac_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2216 
Symbol 
ID7401151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2201058 
End bp2201411 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID643709288 
Producthypothetical protein 
Protein accessionYP_002566863 
Protein GI222480626 
COG category[R] General function prediction only 
COG ID[COG2118] DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.177164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA ACCCCGACGA CGAACGGCTC GAAGAGCTGC GAGAGAAGAA GATGCAGGAG 
CTTCGCGAGC GCGAACAGGG CGGCGGCGCC GACGCCGAGG CGCAACAGGA GGCCCAACAG
CGCGCCGAGG CGCAACAGGA GGCCGTGCTC AAACAGTACC TCACCGACGG CGCGCGCCAG
CGGCTCAACG CGGTCGCGAT GTCGAAGCCG GAGTTCGGTG ATAAGGTGAA ACAGCAGGTC
GCGGCACTCG CACAGAGCGG CCGGATCCAG GGACAGATCG ACGAAGACCA GATGCGCGAC
CTCCTGAAGG AACTCCAACC CGACCAGCAG AGCTTCGACA TTCGGCGGCG ATAG
 
Protein sequence
MSENPDDERL EELREKKMQE LREREQGGGA DAEAQQEAQQ RAEAQQEAVL KQYLTDGARQ 
RLNAVAMSKP EFGDKVKQQV AALAQSGRIQ GQIDEDQMRD LLKELQPDQQ SFDIRRR