| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2210 |
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| Symbol | |
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| ID | 7401145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2193098 |
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| End bp | 2194402 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709282 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_002566857 |
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| Protein GI | 222480620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.277896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGT ATCACATCGA AACGTACGGC TGTAGTTCCA ACCGGGGCGA GAGCCGGGAG
ATAGAGCGGG CGCTACGCGA CGGCGGCCAC CGCCCGGCCG ACGGTCCCGA AGACGCGGAT
GTCGCCATCC TCAACACCTG TACGGTCGTC GAGAAAACGG AGCGGAACAT GCTCCGGCGC
GCCGAGGAGC TGGAAGACGT AACCGCAGAG CTCGTCGTCA CCGGCTGCAT GGCGCTCGCG
CAGGGCGACG CTTTCCGCGA GGCCGGCGTC GACGCCGAGA TCCTCCACTG GGACGAGGTG
CCCTCGCACG TGCTCAACGG CGAGTGCCCG ACGGTCACCC CAGACGCCGA GCCCGTCTTA
GACGGCGTCG TCGGTATCCT CCCCATCGCG CGCGGCTGCA TGAGCAACTG CTCGTACTGT
ATCACGAAGT TCGCGACCGG TCGGGTCGAT TCTCCCACTG TCGAAGAGAA CGTCGAGAAG
GCCCGCGCGC TGGTCCACGC CGGCGCCAAG GAGATTCGGG TGACCGGACA GGACACCGGG
GTCTACGGCT GGGACAACGG CGATCGGAAG CTGCCGGAGC TGCTCGACCG GATCTGCGAC
ATCGACGGTG ACTTCCGAGT TCGACTCGGG ATGGCCAACC CCGGCGGTAT CCACGGCATC
CACGAGGAGC TGGCCGAGGT GTTCGCCGAC AACGAGGAGC TGTACGACTT CATCCACGCA
CCGGTCCAGT CCGGCTCCGA CGACGTACTC GAAGACATGC GCCGCCAGCA CCGCGTCGAG
AAGTTCCGCG AGGTCGTGGA GACCTTCGAC GACCGGCTCG ACCACTGGAC ACTGTCGACC
GACTTCATCG TCGGCTTCCC GACCGAGACC GAGGCCGACC ACGAGCGCTC GATGGACCTG
CTCGCCGAGG TCCGCCCGGA GAAGATCAAC GTCACCCGCT TCTCGAAGCG CCCCGGTACC
GACGCCGCCG ACATGAAGGG GCTCGGCGGG ACGATCAAGA AGGAGCGCTC GAAGGCGATG
TCCGAGCTGA AGATGGAGGT CGTCGGCGAC GCCTACGAGT CGATGGTCGG CGAGACCTTC
GAGGTCCTCG TCGTCGAGGA GGGCACCGGC GACTCCGTGA AGTGTCGCGA CGGCGCTTAC
CGGCAAATTA TCGTCCAGAA CGCGGCGGAG CGCGGCGTCG CAGTGGGTGA CTTCCTGGAG
GTGGAGGTGA CCGGTCACAA CACCGTCTAC GCGTTCGGCG AGCCGACTGA TGGCGGTCGA
CCCGTCGACG AGGACCCCGC CGAGTCGACC CCGTCGTCGG CGTAA
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| Protein sequence | MATYHIETYG CSSNRGESRE IERALRDGGH RPADGPEDAD VAILNTCTVV EKTERNMLRR
AEELEDVTAE LVVTGCMALA QGDAFREAGV DAEILHWDEV PSHVLNGECP TVTPDAEPVL
DGVVGILPIA RGCMSNCSYC ITKFATGRVD SPTVEENVEK ARALVHAGAK EIRVTGQDTG
VYGWDNGDRK LPELLDRICD IDGDFRVRLG MANPGGIHGI HEELAEVFAD NEELYDFIHA
PVQSGSDDVL EDMRRQHRVE KFREVVETFD DRLDHWTLST DFIVGFPTET EADHERSMDL
LAEVRPEKIN VTRFSKRPGT DAADMKGLGG TIKKERSKAM SELKMEVVGD AYESMVGETF
EVLVVEEGTG DSVKCRDGAY RQIIVQNAAE RGVAVGDFLE VEVTGHNTVY AFGEPTDGGR
PVDEDPAEST PSSA
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