| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2153 |
|---|
| Symbol | |
|---|
| ID | 7401086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2140922 |
|---|
| End bp | 2141965 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643709223 |
|---|
| Product | isocitrate lyase and phosphorylmutase |
|---|
| Protein accession | YP_002566800 |
|---|
| Protein GI | 222480563 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0855957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCCA ACGAACTCGA CGACGACGTC TTCACGAAAG ATATCGATAA CCCCGCCGGC
CGCCGGCTCC GCGAGCTGTT CGAGGAGCAG GACTACACGT TCGCGCCCGG GATCTACCAC
GCGCTCGACG CCCGCCTCGC GGAGATGGCC GGGCTCGACG CCGCCTACAT GAGCGGCTAC
TCGACCGTCC TCGGCCAGTT CGGCTTCCCA GACCTGGAGA TGGTCACGAT GTCGGAGATG
GTCGAGAACG CGAAGCGCAT GGTCGAGGCG ACGAACCTCC CGGTTATCGC CGACTGCGAC
ACCGGCTACG GCGGCACCCA CAACGTCCGC CGGGCAGTTC GCGAGTACGA GAAGGCCGGT
GTCGCCGCGA TCCACATCGA GGACCAGACG ACGCCCAAGC GCTGCGGCCA CATCGCCGGG
AAGGAGGTCG TCTCCCAGGA GCAGGCGCGC TCGCGCTTCG AGGCCGCCGT CGACGCCAAG
CAGAGCGAAG ACACCGTCAT CATCGCTCGC ATCGACTCGT ACGGCTCCGC CAACGGCGAC
TGGGAGGACC ACCTCGAACG CGGCCGGATC TACGCCGACG CCGGCGTCGA CCTCGTCTGG
CCGGAGATGC CCGACCCGTC GCGCGAGGAC GCGATCGAGT ACGCCGAGAC GATCCACGAG
ACCCACCCCG ATCTGGATCT CGCCTTCAAC TACTCCTCCT CGTTCGAGTG GGGCGCACAG
GAGGACCCGC TCACCTTCGA GGAGCTGGGC GATCTGGGCT ACCAGTACAT CTTCATCACG
CTGTACGGGC TCCACTCGGG CGCGCACGCC GCCTACGAGG ACTTCGCGAA CATCGCCGAA
AACGACGAGG AGGCGCAGTT CGACCTCGAA GAGCGGTACA TCGGCCACGA GACCGAGAGC
CACCACGAGC TCTCCTTCGT CCCGCGGTAC CAGGACATCG AGGCCCAGTT CGACCCCGAC
GCCAGCCGGC GCCACGAGGA GTCGGCCGGC TTCACCGACG AGGAGAGCGA CCCGATCACC
ACCGAGAGCA ACGACGACGA CTGA
|
|---|
| Protein sequence | MYPNELDDDV FTKDIDNPAG RRLRELFEEQ DYTFAPGIYH ALDARLAEMA GLDAAYMSGY
STVLGQFGFP DLEMVTMSEM VENAKRMVEA TNLPVIADCD TGYGGTHNVR RAVREYEKAG
VAAIHIEDQT TPKRCGHIAG KEVVSQEQAR SRFEAAVDAK QSEDTVIIAR IDSYGSANGD
WEDHLERGRI YADAGVDLVW PEMPDPSRED AIEYAETIHE THPDLDLAFN YSSSFEWGAQ
EDPLTFEELG DLGYQYIFIT LYGLHSGAHA AYEDFANIAE NDEEAQFDLE ERYIGHETES
HHELSFVPRY QDIEAQFDPD ASRRHEESAG FTDEESDPIT TESNDDD
|
|---|
| |