Gene Hlac_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2131 
Symbol 
ID7400651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2121821 
End bp2122498 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID643709201 
Productsiroheme synthase 
Protein accessionYP_002566778 
Protein GI222480541 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGC TGTACCACGA CTTCACCGGC GAGACGGTGC TGGTGTTCGG CGGCGGCACC 
GTCGGGTCGC GGAAGGCGTC CCGGTTCGCC GACGAGGCGC GAGTCGTCGT CGTGAGCCCC
GGCTTCGACG ATCGGCTGGT CGACCTCGCC GAGGAAGATC GCGAGTCAGT AGAACTGGTC
CGCGCCACAC CTGACGCCGA GGCCATCCAC GGGTGGATCG ACCGCGTCGA CCCCGCTCTC
GTCGTCGCCG CCACGGACGA CGCGGCCGTC AACGCGGCAG CCGAGGCGGC CGCGCTCGAC
ACCGGCGCGC TCGTCAACCG GACCGACGTG TCGGCCGGGG ACCGTTCGGG CGGCCGAGAC
GTGCGGAGCG TCGTCGTCCC GGCGACGATC GAGGACGACC CGGTCAGGGT GGCGCTCTCG
ACCGGGGGCG CGAGTCCGGC GCTCGCGAAG GCGCTCCGCG AGCGGATCGA AGCGGAGATC
GACGGCGCCG GCGCGATGGC GGAGCTGTCA GGGACGCTCC GTGCGGAGCT CAAAGACCGA
GATGTCCCCC CCGAGAAACG TCGGGAAGCG ATCCGCCGCG TCGTGCGATC CGAGGGGGTT
TGGAAGGCTT TACAAAAGGG GGATTCCTAC GGCCGGCAAG AGGCAGATTC CGTGATCGAG
GAGGTACTCA ATAGATGA
 
Protein sequence
MIPLYHDFTG ETVLVFGGGT VGSRKASRFA DEARVVVVSP GFDDRLVDLA EEDRESVELV 
RATPDAEAIH GWIDRVDPAL VVAATDDAAV NAAAEAAALD TGALVNRTDV SAGDRSGGRD
VRSVVVPATI EDDPVRVALS TGGASPALAK ALRERIEAEI DGAGAMAELS GTLRAELKDR
DVPPEKRREA IRRVVRSEGV WKALQKGDSY GRQEADSVIE EVLNR