Gene Hlac_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2102 
Symbol 
ID7400622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2092860 
End bp2093732 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content70% 
IMG OID643709172 
Producthypothetical protein 
Protein accessionYP_002566749 
Protein GI222480512 
COG category[S] Function unknown 
COG ID[COG3403] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0811707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0958552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC CCGGCACCGA GGGCGTGCTG TTGGACCAGA AGACGCTCCA CGATCGGCTC 
GACGACGCGC CCGGGTGGCT CCAGGACCAC TACCGCACCT TCCGCGAGTC GATGCTCGGC
GAGCGCGACG ACTCGCCGTT CCCCTGCTAC TTCGGTATCG AGGTCGAGCG CGAGGGCGAC
CTGCTGTACG CCGCCTGCGA ATCGACCACC GATCCGGCGG CCCTGCTCCG ACTCCGGGAC
GTACTCGTCG AGTATCTCGA CGCCTACGCG GACCACGCCG ACCGCGCCCC GTTGGCGGTC
TTCTTTCGGC CGCCCGAAGG CGATCCCGGT GAGTCGCACT ACCACGAGCG GCTGTGGCAC
GTCCTCGAGT TCCTCCACGT CCACGACCCC GAGCCGTGGC CCGACGACAT TCCGACCGAT
CCGGACACCC CGCGCTTCGA GTTCTGTTTC GGCGGCGAGC CGCTGTTCCC GACCTCTCGC
GCACCGTTCT ACGACGAGCG AAAGAGCCGA TACTCGCCGG TCGGCCTGGA GGTCACTTTC
CAGCCGCGAG CCGTCTTCGA CGGGCTCACC GCCGACACCG AGGCGGGTCA ACACGCCCGC
GAGACGATCC GCGAGCGCAT GGGCGAGTAC GACGGGGTCT GTCCCCACGC CGATCTCGGC
GACTGGGGCG TCGAGGGCGA CCGCGAGTGG ACGCAGTACC TGTTCCGCGA GGACGACGAC
GCGAGCCCGG ATATCTGTCC CCTGAGTCCG ACCCGCAACC ACCCGAAGGC GCCCGCGGCG
CTGTTGGAGC CGGGCGCGTG GCGTCGACTC GCCGAGTCGC CCGCGCCCGA CGACGACGCC
GGGTCCGTGA TCGCGGGGAC CGGCGATGAC TGA
 
Protein sequence
MNEPGTEGVL LDQKTLHDRL DDAPGWLQDH YRTFRESMLG ERDDSPFPCY FGIEVEREGD 
LLYAACESTT DPAALLRLRD VLVEYLDAYA DHADRAPLAV FFRPPEGDPG ESHYHERLWH
VLEFLHVHDP EPWPDDIPTD PDTPRFEFCF GGEPLFPTSR APFYDERKSR YSPVGLEVTF
QPRAVFDGLT ADTEAGQHAR ETIRERMGEY DGVCPHADLG DWGVEGDREW TQYLFREDDD
ASPDICPLSP TRNHPKAPAA LLEPGAWRRL AESPAPDDDA GSVIAGTGDD