| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2100 |
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| Symbol | |
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| ID | 7400620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2090787 |
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| End bp | 2092262 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643709170 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002566747 |
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| Protein GI | 222480510 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.114433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG TCGACCGCGA GGCGATCACG GACGGGCCGG TGGGGCGAGT GCTCCTGCTA
CTCGCGGCCC CGCTCGTCGC GCAGAACCTC GTGTACGTCG CGAACGCCCT CGTCGACACG
TTCTGGCTCG GCCGGGTGAG CGAGGACGCG GTCGCCGCGG TCGGGCTCAG CCTCCCGATC
CAGTCGCTTT TGGGCGCGGC GGTGGTCATC GCCGCCGTCG GGACGCAGAT CCTCGTCGCG
CAGCGCGCCG GCGGCGAGGA TGGTTCGGGC GCGCGACGGG TCGCGGTCAA CGGCGCGCTC
GTCGCGCTCG CGGTCACCGG AGCGATCGCG GTCCCCGTCG TCGCGTATCC GGAGGAGCTG
GTTCGACTCC TCGGCGCGGA CCCGGCGCTC GCCGGCACCA CCGCGACGTA CCTCGCGATT
ATCGTCGCCG TGCTCCCGGT CGGCGCGGTC GGCGACACGG TGGAGAACTG CTTCACCGCC
TACGGCGACA CGCGGGCCGT CCTCCACGTG AGCGTCGTCA GCGTCCTCGT CAACCTCGTT
GCGGCGCCCG CGCTCATCTT CGGCGTCGGA CCGGTCCCGG AACTCGGCGT CGCGGGCGCG
GCCCTCGGTA CCGTACTCTC CGGCATTGTC GGATTCGTTC ACATACTCGC GTACGCCGCG
GGGATCGGGC GGGACACGTT CCGGCTCACC CGCGACGCGT TCGCCGTCGA TCTCTCTGTC
GTGCGCGAGG TCGTGGCAGT CGGGCTCCCC CTCGGTGGCC AGCGCGGAGT GAGCGAACTG
GTCCGCGTGC TCGTGGTGAG CCTCGTAGCG ATCGCCGGCG GCGCGGCCGG GGTCGCGGCG
TACACGGTCG GCGCGCGCGT CGCCACGCTC GCGGTCGTCC CCGCACTCGG GATGCAGCAG
GCGGCCCAGT CGATGATCGG CCAGAACCTC GGCGCGGACG CCCCGCACCG CGCCCGGCGG
ACGACGATGG TCGGCACCAA ACTGGTCGTC GTCGGCTTCC TCGCGCTCGG CGCCGTCCAG
TTCCTGTTCG CCGGCGCGAT CGCCGACCTC CTCGCGCCCG ACCTCACCGC GACCGGCCGG
TCGCTATCGG TGTTGTATCT ACGGATTCTG GCGGTCACCT ACTGGGCGCT CGGCGGGACC
TACACCCTGC TCGCCGGCTT CAACGGCGCT TCGCGCACCC GAACCTCGTT CGTCGCGGAT
CTGATCAAGT ACTGGGCGAT TCGGTTCCCC ATCGCCGTCG CCGCGGTGCC CGCCACCGCG
ACGTTCGGGG CGTTCGGGGC GTTCGGCGTC GCGGTCGCGC CCGGACTCGG CTGGGGAGTT
GAGGCCGTCT TCTGGGCGGT CGCCGCCTCG AACGTCGTCG GCTTCCTCGG ACTGGGCGCG
TACTTCTGGT ACACGACGCG GCGGGGGATG TTCGCGAACG CCGCCGAGCG CGCGAGCGGC
GGGGACGGTG CGGGCGCGGA CCCGGCGGAC GACTGA
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| Protein sequence | MLDVDREAIT DGPVGRVLLL LAAPLVAQNL VYVANALVDT FWLGRVSEDA VAAVGLSLPI
QSLLGAAVVI AAVGTQILVA QRAGGEDGSG ARRVAVNGAL VALAVTGAIA VPVVAYPEEL
VRLLGADPAL AGTTATYLAI IVAVLPVGAV GDTVENCFTA YGDTRAVLHV SVVSVLVNLV
AAPALIFGVG PVPELGVAGA ALGTVLSGIV GFVHILAYAA GIGRDTFRLT RDAFAVDLSV
VREVVAVGLP LGGQRGVSEL VRVLVVSLVA IAGGAAGVAA YTVGARVATL AVVPALGMQQ
AAQSMIGQNL GADAPHRARR TTMVGTKLVV VGFLALGAVQ FLFAGAIADL LAPDLTATGR
SLSVLYLRIL AVTYWALGGT YTLLAGFNGA SRTRTSFVAD LIKYWAIRFP IAVAAVPATA
TFGAFGAFGV AVAPGLGWGV EAVFWAVAAS NVVGFLGLGA YFWYTTRRGM FANAAERASG
GDGAGADPAD D
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