Gene Hlac_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2099 
Symbol 
ID7400619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2089727 
End bp2090665 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content69% 
IMG OID643709169 
Productlipoyl synthase 
Protein accessionYP_002566746 
Protein GI222480509 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.350407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.100135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCG GCCGTCGGAA GCCGGACTGG CTGAAGTCGC GCCCCCCGTC CGGGTCCCGG 
TTCACGGAGA TCAAGGAACG CCTCCGCGAG CGCGACCTCC ACACGGTGTG TGAGGAGGCA
AACTGCCCCA ACATGGGCGA GTGCTGGTCC GGCCGGGACG GCCCCGGCAC CGCGACGTTC
ATGCTCATGG GTGACCGCTG CTCGCGCGGG TGTAACTTCT GTGACGTGGA GACGGGCGGG
ATGAAGTCGC TCGACTCGGA CGAGCCCGAG AACGTCGCGG ACGCGGTCGC CGAGATCGGG
CTCGACTACG TCGTGCTCAC GTCGGTCGAC CGCGACGACC TCGCGGACGG CGGTTCCGAG
CACTTCGCCG AGACGATCCG CGAGATCCAG CGGCGCGACC CGGAGATCCT CGTCGAGACG
CTGATCCCCG ATTTTCAGGG CGACCCCGAG GCGATCGACC GGATCATCGA CGCGGGGCCG
GACGTGATCG CCCACAACGT CGAGACGGTC GAGCGCCTCC AGTGGCCGGT GCGGGACCGG
CGGGCCGACT ACGAGCAGTC GCTCGCGGTC CTCGATCGGG TCGGCCGCGA GTCCGATATC
CACACCAAGA CGAGCCTCAT GCTCGGCGTG GGCGAGTACG ACCACGAGGT GTACCGGACC
CTCGGCGACC TCAGCGAGGT GGGCGTCGAC GTGGTCACGT TCGGGCAGTA CCTCCAGCCC
TCGCGCTCGC ACCTCGACGT GTTCGAGTAC GTCCACCCCG ATGTCTTCGA GACGTGGCGC
GCGGTCGCCG AGAGAGAGTT CGACTTCCTC TACTGCGCTT CGGGACCGAT GGTCCGCTCC
TCGTACAAGG CCGGTGAACT GTTCGTCGAG GCGCTGCTCC GGGAGGGGCG CTCACCCGAG
GACGCACGGC GTCACGCGCG GGCCGCGGGC GGAGACTGA
 
Protein sequence
MQRGRRKPDW LKSRPPSGSR FTEIKERLRE RDLHTVCEEA NCPNMGECWS GRDGPGTATF 
MLMGDRCSRG CNFCDVETGG MKSLDSDEPE NVADAVAEIG LDYVVLTSVD RDDLADGGSE
HFAETIREIQ RRDPEILVET LIPDFQGDPE AIDRIIDAGP DVIAHNVETV ERLQWPVRDR
RADYEQSLAV LDRVGRESDI HTKTSLMLGV GEYDHEVYRT LGDLSEVGVD VVTFGQYLQP
SRSHLDVFEY VHPDVFETWR AVAEREFDFL YCASGPMVRS SYKAGELFVE ALLREGRSPE
DARRHARAAG GD