Gene Hlac_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2078 
Symbol 
ID7400598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2065885 
End bp2066178 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content62% 
IMG OID643709149 
Producttranslation initiation factor Sui1 
Protein accessionYP_002566726 
Protein GI222480489 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.157753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.161852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAG TCTGCTCGAC GTGCGGACTG CCCCAGGAAC TCTGCGTCTG CGAGGACGTC 
GCGAAAGAGT CCCAGCAGAT CAGCATCCGC ATCGACGAGC GCAGGTACGG TAAGGAGGTA
ACGGTCATCG AAGGATTCGA CCCGAAAGAC GTGGACATGA GCTCCCTCTC GTCGGATCTC
AAGTCGAAGT TCGCCTGCGG CGGCACCGTC GAGGACGGCG CCATCGAGCT GCAGGGGAAC
CACTCGGGTC GCGTGGAGGA TTTCCTCCGC GATAAGGGCT TCAACGTCGC GTGA
 
Protein sequence
MSEVCSTCGL PQELCVCEDV AKESQQISIR IDERRYGKEV TVIEGFDPKD VDMSSLSSDL 
KSKFACGGTV EDGAIELQGN HSGRVEDFLR DKGFNVA