Gene Hlac_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2039 
Symbol 
ID7402058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2032000 
End bp2032836 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID643709110 
Producthypothetical protein 
Protein accessionYP_002566687 
Protein GI222480450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.112311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC TTCCGTTCGG CGTCGCCCGG CTCGACTCGA TCCTCGAGGG CGGGGCGCCG 
CCGGGGAACG TCGTGTTGCT CGCGGGCGAG TCCGGCGCCG GCGCGCGCGA GTTCCTGTAC
ACCAGCGCGG CGATGAACGC CCTCGGACAC GCCGACGCGG AGCTGTTCGA CCTTTACTAC
GGCGACCTCC CCGCCGACGC GGCACTCCCG GATGAGGTTC ACTACCTCTC TTTTACCGCC
GACACGGGCG CACTCACCCG CGAGATGGGA TACACGATGG CCGACGAGAT CGTCGACGCC
GCGATCGACG GGATCGAGTT CCGGGACCTC TCGCCGGAGT ATTTCCAGCT CAGCCCGATC
CCGCGCGACT GGTACGAAGA CGAGACGGCG TCGATCACGG AGCTGGGCGA CCGCGGCGAG
TACGAGGACG TGCTCACCGC GTTCGGCGAC TACCTGTCGG CACACGCCGA CGACAGCCTC
GTCTGTATCG ACTCCGTGAC CGATCTCGTC TCGATGGTCG ACGACGACAC CGAGTGGAGC
GACGTGGCGA TGGTGATGAA GGGGCTCAAG AAGGCGGCCT ACGAGTGGGG CGGGCTCACC
CTCGTGTTGG TGAACACCGA CTCGATCACC GACCGCGAGT TCGGCGCGCT GATGGACGCG
GCGGGCGGCA CCCTCCAGTT CACGTGGGAG AGCGGCGGCT CGCAGCGCGC CAGAACAATG
TTCGTCCGCG AGTTCCGCGG CGTGCTCTCC CGGCTGGAGT CCGAGAACAT CGTCCGCTTC
GAGACCGAGA TCCACGAGGG CGGCTTCGAC ATCAGCGACG TGCGCAAGAT CCGGTGA
 
Protein sequence
MPSLPFGVAR LDSILEGGAP PGNVVLLAGE SGAGAREFLY TSAAMNALGH ADAELFDLYY 
GDLPADAALP DEVHYLSFTA DTGALTREMG YTMADEIVDA AIDGIEFRDL SPEYFQLSPI
PRDWYEDETA SITELGDRGE YEDVLTAFGD YLSAHADDSL VCIDSVTDLV SMVDDDTEWS
DVAMVMKGLK KAAYEWGGLT LVLVNTDSIT DREFGALMDA AGGTLQFTWE SGGSQRARTM
FVREFRGVLS RLESENIVRF ETEIHEGGFD ISDVRKIR