| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2032 |
|---|
| Symbol | |
|---|
| ID | 7402051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2024425 |
|---|
| End bp | 2025423 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643709103 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_002566680 |
|---|
| Protein GI | 222480443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.46077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.343668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CCCTGTTCCT GACAAGCGCC GATGTCGACG ACCTCGCCGA ACCGGCCGAC
TACGTCGCGG TCGTTCGCGA CGCCTACCGC CAGATCGGCG AAGGCGCGCC CGCGGAGCCG
CGGACGAAAC TGCTCAACCG CGAGCCGCCG GGAATGCTCA CCACCTACGC CGCGGTGCTT
CCGGAGACCG GCGCGATGGG CGGGTACACC TACTCCGCCG GCTTCGGCGC GGGCGACGCG
TGGTTCATGA CGCCGTTGTT CGACGCCGAG TCGGGCGAGC CGCTCGCGCT ACTCGACGGC
GCGTCGATGA ACCCGTTTAA AACGGGTGCT GCGGGCGCGG TCGCGGTGGA CGCGCTCGCT
CGCGCTGACG CGACCGAGAT CGCCGTGATC GGGAGCGGCG CGCAGGCCCG CGGCCAGCTC
GCGACGACCG CGACCGTGCG CGACTTCGAG GCCGTTCGGG TGTTCTCCCC GACCGCGGAG
AACCGCGAGG CGTTCGCCGA GGAGTTCGAC GACCGGCTCG ACGCCGACGT GTCGGCGGTC
GCGAGCGCGA GCGAGGCCCT TGACGGCGCC GACGTGGTGA TCACCGCGAC GACCGCGAGC
GAGCCCGTGA TCGACGACGC CGATGTCGAG CCCGGTACCC ACGTAACGGC AATGGGGCAG
TATCACCCGA AGAAGAACGA GCTGCCGCCC GAGCTGATCG CGCGGGCGAC GTACGTCCCC
GATATCCGGG CGCGGGCGGC GCAGGACGCC GGGTCGTTCC TCGCGGCGAT CGAGGCGGGG
CTGATCGACG AGGACCACGT CGCCGCCGAT CTGGGCGAGG TCGTCGCCGG CGAGCATCCG
GGCCGGACGA GCGACGACGA GGTGACCGTC TTCGACTCGG GCGGGACCGG TATCGAGACG
GTCGCGGCCG CGCACATGCT TTATAAGCGA GCAAGCGAGG ACGGGCGGGG ACAGACGATC
GACTTCGCGC CCGCGAGCGA GGCGCTTACT GGGAAGTGA
|
|---|
| Protein sequence | MTDTLFLTSA DVDDLAEPAD YVAVVRDAYR QIGEGAPAEP RTKLLNREPP GMLTTYAAVL
PETGAMGGYT YSAGFGAGDA WFMTPLFDAE SGEPLALLDG ASMNPFKTGA AGAVAVDALA
RADATEIAVI GSGAQARGQL ATTATVRDFE AVRVFSPTAE NREAFAEEFD DRLDADVSAV
ASASEALDGA DVVITATTAS EPVIDDADVE PGTHVTAMGQ YHPKKNELPP ELIARATYVP
DIRARAAQDA GSFLAAIEAG LIDEDHVAAD LGEVVAGEHP GRTSDDEVTV FDSGGTGIET
VAAAHMLYKR ASEDGRGQTI DFAPASEALT GK
|
|---|
| |