| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2006 |
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| Symbol | |
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| ID | 7402025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2000174 |
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| End bp | 2001763 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643709077 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002566654 |
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| Protein GI | 222480417 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.300214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.433718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGTC GATACGTGAA CGACGGACTC GGTGCCGGTG GCGACGGCGA GCGCGAGGCG
GCGAGCGACG ACGACAGCGT CCCCGACGCC GAGCGCGAGG CGCTCCTGAC GATCGCGGGC
GGAGCCGTGA TCACCGCCGG CGGTGTCTCC GGCCAGCGCG CGCTCACGGC CGTGACGGAG
TTCGCGCTCG CTCGCGGACT CGGCCCGGCC GCCTACGGCG TGTACGCACT GGCGTGGCGG
ATCGCCCAGT TGCTCTCGCG GCTCGTCACG TTCGGGAGCG TGCCGGCGCT CCAGCGCTAC
CTCCCCGAGT ACGCGGACGA CCCCGACCGA CAGGGGGTCG TCGCCGGGCT CGCGTACGCC
ACGACGCTCG GATTCGGTGC CGCCATCGCC GCCGGAATCT GGGTGGCAGC ACCGCGGATC
AACGCGCTCA CCGTCGAGGC CCCCGCGTTC CCGCCGACGA TGCGCGCGTT CGGCTTCCTC
GTCGGATCGC TCGGCGTCGT GATGGTCGCG TCGGCGATCT TCCGCGCGGT CGGGTCCGCG
CGCGGCGAGA TCGCCTTCAA CAAACTCCTC CGCCCGGGCG TCCGGCTCGT GGGCGCGCTT
ACGGCGCTGG CGCTCGGCTA CTCGGTCGTC GGCGTCGCCG GCGGCATCGT CGTCGCGACC
GCGCTGCTCG CGGCCGTCGC CGCGCCCCTC TCCGCGCGGG TGACCGGGAT CGTCCCGTCG
CTGCGGGGAG TCCGTGGGGA GGCGGGGCGG TTCTACAACC ACGCGGCGCC GGTCGCGATG
AGCAGCCTCG GGAAGGTGTT CCAGAACCGC GTTGACGTGT TGCTCGTCGG AGCGCTGTTG
ACGGCGACCG CCGCGGGCGT GTACAACGTC GTCCTCGTGT TGATCGCGAT CGCGTGGATC
CCCCTCATCG CGTTCAACCA ACTGCTGCCG CCGGTCGCCT CGGATCTGTA CGCCGACGAT
CGGATCGAAA CGCTCAACGC GGTGTACACG TCGGTGACCC GTCAGATCGT CACGAGCGTG
ATCCCGATCC TCGCCGTGCT CGTGGTGTAC GGCCGGGAGC TACTCGGGCT GTTCGGCGAG
CCGTACGTCG CAGGGTACGC CCCCCTCGTC GTCTACCTCG GCGGGGTGTT CGTCGGCAGC
GCGGTGGGCG CGACCGGCTG GCTCCTGATG ATGACCGACC ACCAGTACGC CCGGATGGCG
CTCGACTGGC TGCTCGCCGT CCTCAACGTC GCCTTAACGT ACGCATTCGT GGTCCGGTAT
GGGCTCGTCG GCGCCGCGCT CGGCACCTCG CTCGCGATCG CGGTGCAAAA CGCGATTCAG
GTCATCCTGT TGCGCCGCTT CGAGGGGCTG TGGCCGTTCG ACCGCACCTA CCTCACCCCG
CTGGTGGCCG GCGGCGTGAC GTTCCTCGCG ATGCGAGCAA TTCGGGAGGT TGCCCCCGGG
CGAGCCGCGG TCGTCGTCGG GGCCGCGGGC GGGCTCGTGG TCTACGCGGG CACGCTACAC
GTCCTCGGCG TTGATCCCCG AGACCGGCTC GTCGCACGAG AGCTTGCGGG GCGGTACCGT
GGGGCCCTCG CCGAGTGGCT CGGTCGGTAA
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| Protein sequence | MSSRYVNDGL GAGGDGEREA ASDDDSVPDA EREALLTIAG GAVITAGGVS GQRALTAVTE
FALARGLGPA AYGVYALAWR IAQLLSRLVT FGSVPALQRY LPEYADDPDR QGVVAGLAYA
TTLGFGAAIA AGIWVAAPRI NALTVEAPAF PPTMRAFGFL VGSLGVVMVA SAIFRAVGSA
RGEIAFNKLL RPGVRLVGAL TALALGYSVV GVAGGIVVAT ALLAAVAAPL SARVTGIVPS
LRGVRGEAGR FYNHAAPVAM SSLGKVFQNR VDVLLVGALL TATAAGVYNV VLVLIAIAWI
PLIAFNQLLP PVASDLYADD RIETLNAVYT SVTRQIVTSV IPILAVLVVY GRELLGLFGE
PYVAGYAPLV VYLGGVFVGS AVGATGWLLM MTDHQYARMA LDWLLAVLNV ALTYAFVVRY
GLVGAALGTS LAIAVQNAIQ VILLRRFEGL WPFDRTYLTP LVAGGVTFLA MRAIREVAPG
RAAVVVGAAG GLVVYAGTLH VLGVDPRDRL VARELAGRYR GALAEWLGR
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