| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2002 |
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| Symbol | |
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| ID | 7402021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1995972 |
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| End bp | 1996964 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709073 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_002566650 |
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| Protein GI | 222480413 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0546697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.289046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT CGGACGCGAC CGCCGTAGCG GGGGCCGGCG TCGACGGCGA CGCCCCCGAG
CTGCCGGCCG ATCTCGATGC GGTCCGCGAT GCACTCGTCG ACTGGTACGA GGCGGACCAC
CGCGAGTTCC CGTGGCGACG CACAGAGGAC CCCTACGAGA TCCTCGTCAG CGAGGTGATG
AGCCAGCAGA CACAGCTCGA CCGAGTCGTC CCCGCGTGGG AGGACTTCGT CGAGGAGTGG
CCGACGACCG AGGAGTTGGC CGAGGCCGAC CGCGGCGGCG TGGTCGCGTT CTGGTCCGAC
CACTCGCTCG GCTACAACAA CCGCGCGAAG TACCTCCACG AGGCCGCCGG ACAGGTAGAA
GGGGAGTACG GCGGGACGTT CCCGGAGACG CCCGAGGAAC TACAGGAGCT GATGGGCGTC
GGCCCGTACA CCGCGAACGC GGTGGCGTCG TTCGCGTTCG ACAACGGCGA CGCCGTCGTC
GACACCAACG TGAAGCGGGT GCTCCACCGC GCGTTCGCGG TCCCGGACGA CGACGCGGCG
TTCGCGCAGG TCGCATCGGA CGTGATGCCC GACGGCGAGT CCCGTATCTG GAACAACGCG
ATCATGGAGC TCGGTGGCGT CGCCTGCGGG ACGACCCCGC GGTGTGACGA GGCCGGCTGT
CCGTGGCGGA GATGGTGTCA CGCCTACGAA ACCGGCGACT TCACCGCGCC CGACGTGCCC
GAGCAGCCGA GCTTCGAGGG AAGTCGTCGG CAGTTCCGAG GTCGGATCGT CCGACTCCTC
GGCGAGTACG ACGAGCTGGC GCTCGACGAT CTCGGCCCCC GCGTCCGAGT CGACTATTCG
CCCGACGGCG AGCACGGCCG AGAGTGGCTG CGCGGGCTCG TCGACGACCT CGCGGACGAC
GGGCTCGTGG CGATCGAAGA GCGCGCAGGG GCGGACGAAG GGCGTTCGGC GGACGACGGA
GCGAGCGAGG TCGTCGTCTC TCTGCGGCGG TGA
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| Protein sequence | MTDSDATAVA GAGVDGDAPE LPADLDAVRD ALVDWYEADH REFPWRRTED PYEILVSEVM
SQQTQLDRVV PAWEDFVEEW PTTEELAEAD RGGVVAFWSD HSLGYNNRAK YLHEAAGQVE
GEYGGTFPET PEELQELMGV GPYTANAVAS FAFDNGDAVV DTNVKRVLHR AFAVPDDDAA
FAQVASDVMP DGESRIWNNA IMELGGVACG TTPRCDEAGC PWRRWCHAYE TGDFTAPDVP
EQPSFEGSRR QFRGRIVRLL GEYDELALDD LGPRVRVDYS PDGEHGREWL RGLVDDLADD
GLVAIEERAG ADEGRSADDG ASEVVVSLRR
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