Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2000 |
Symbol | |
ID | 7402019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1994833 |
End bp | 1995483 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643709071 |
Product | hypothetical protein |
Protein accession | YP_002566648 |
Protein GI | 222480411 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0268912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.270063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAA CCGTTCTCAT TCCCGGCGGC CGCGACGTGC GCGCCACCCT CGACACCGCC GCGAGCGACG GCGGTGGCGA CGCCACCGGG AACGGGTCCC GGGCCGACGC GGTCGTCGTC GCCTGCCCGC CGCACCCCCA ACAGCGCGGC CACCGCGGCG ACGAGCGCCT GACCGCCGTC AGCAACGCGC TGACCGATCG GGGGATCGAC TGCCTTCGGT TCGACTACGG TGACTGGGAC GAAGGATACG GCGAGAGCAC TGACGCCGAC AACACGGTCG GCTGGGCGGT CGAGCGGTAC GAGCGCGTCG GGCTGTTCGG CTTCTCGTTC GGGGGGACGG TCGCGCTCGT CACGGCGGCG TCCCGCCCCG GACTCGCCGG GGTCTGCGCG CTCGCGCCGA CCGCGCGACT GAACCCCGAC GTGGACGCAG TTGCGGTCCT CGACGATCTT ATCGATCTCA GCGTGCCAAC GCGGATCCTG TACGCGACCC GCGACTCGAC GGCCGACTGG GAGCCCGTGG TGGAGCGGGC CAAGGAGTTG GGAATCGAGA CGATCGGATT CGAGTCCGAC CACTTCTTCG TCGGGCGGGC AGGTGATGTG GGGGAGGAAG TGGGGGCGTT TTTCGGGCCG CGACTAGAGG ACAGTTTATA A
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Protein sequence | MSETVLIPGG RDVRATLDTA ASDGGGDATG NGSRADAVVV ACPPHPQQRG HRGDERLTAV SNALTDRGID CLRFDYGDWD EGYGESTDAD NTVGWAVERY ERVGLFGFSF GGTVALVTAA SRPGLAGVCA LAPTARLNPD VDAVAVLDDL IDLSVPTRIL YATRDSTADW EPVVERAKEL GIETIGFESD HFFVGRAGDV GEEVGAFFGP RLEDSL
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