| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1995 |
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| Symbol | |
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| ID | 7402014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1989969 |
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| End bp | 1991336 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709066 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_002566643 |
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| Protein GI | 222480406 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.64747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0535228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCACG CCCTCGCCGA AACGGTTGGT GCAGACGCGG CCGTGGGCGT TGTCCGCCCT
GTCACCGCCG TCGTCGCCGT CGGCTTTGCG CGGCCGCGGC AGGCGGTGGT CACCCTCGCC
ACGTTCGCCG TCCTCGCCGT CCTCGTCGCG GGGAGTGCGG CGCTGGCCTA CCGCTGGTAC
TTTCGCGCGG AGATCCCCGA AGGGGTGACC GGTCTGCTGG GCGTCGCCGT CGTCGCGCTG
TACCTCAACA CGACCTCGTT GGGATCGATT GCGGCCGGCG ACAGCCCGAC ACTTCTGGCG
CCCGAGACCG TGTTCTTCAA CGTGGTATCG CTGGGCGTCG CAGTGGTGAT GGCGCCCGTC
GGGAGATACG TTGGCGACCG ACTTGCAGTC GATGTGTTCG CACTCTCCGG AGCCAAACAG
CTCGAAGGCG AGTTGAGTGG CGTCGTGCGC GCGGTGGGAC GGTTCACGGC GGTGACGCTC
CCGTCGGTCG GCGAGATCGG CGACATGGAC ACGTACGACC CCGTCTCGCC GGAGAAGAAG
GCGGAACTCG CCGAGACGAC CCTCCTCTTC CCGCGGAAGC TCTCGGTGGA GGACCTCCGC
GAGCGGCTCG TCGCCCGGCT CAAAGAGGAG TACGGCGTGG GCTACGTCGA CATCGACCTC
GGCACCGACG GGACGGTCGA GTACTTCGCG GTCGGCTCCC GCGCTGCCGG ACTTGGCCCG
ACGCTCGCCC CGGGATCGGC GGCGATCGCG GTGGCTGCGG ATCCGCCGAA CAACGCCACC
GCCGGCGACA CGGTCCAGCT GTGGCGGGAC GATCCCGAGC CGAAACACGT CGCAACCGGG
GAACTACGCG GGGTCGCCGC CGACGCCGTC ACCGTCGCGC TCGACGAGTC GGACGCCGAA
CGCCTGACCG ACGAGGGCGG ATACCGGATC GTGACGCTCC CAGCGGAGCC GCAGGCGGAC
CGCGAGTTCG CCTCCCTGCT GCGGAACGCG GACGAGACGA TGGCATCGGT GGCCGTCGGG
GCGGGGAGCG ACCTCGACGG GAGCACCGTC GGCGACGTCG ACACCGTCGT CGCCGCGGTC
CGGCCGGCCG AGGGTTCCGT CCAGCCGATC CCGCCGCGCG CGTACACGTT CGGTGCCGGC
GACCTCGTGT ACCTCGTCGG TCGCCCGGAC GCGATCCGCC GGTTCGAGGC GGCTGCCGCG
GGAGGAGTCC GGACGGCGTC TGCGGACGGG GGAGATAGCG GGAGCGTCGA CAGCGAGATC
GGTGATAGCG ACACCGACAA CACTGACGAG ACCGACAACA CCGACGAGAC CGACAACACC
GACAAGACCG AGGCCCCCGA AAATTCGGAC CGGGCGCAAC GCTCTTGA
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| Protein sequence | MIHALAETVG ADAAVGVVRP VTAVVAVGFA RPRQAVVTLA TFAVLAVLVA GSAALAYRWY
FRAEIPEGVT GLLGVAVVAL YLNTTSLGSI AAGDSPTLLA PETVFFNVVS LGVAVVMAPV
GRYVGDRLAV DVFALSGAKQ LEGELSGVVR AVGRFTAVTL PSVGEIGDMD TYDPVSPEKK
AELAETTLLF PRKLSVEDLR ERLVARLKEE YGVGYVDIDL GTDGTVEYFA VGSRAAGLGP
TLAPGSAAIA VAADPPNNAT AGDTVQLWRD DPEPKHVATG ELRGVAADAV TVALDESDAE
RLTDEGGYRI VTLPAEPQAD REFASLLRNA DETMASVAVG AGSDLDGSTV GDVDTVVAAV
RPAEGSVQPI PPRAYTFGAG DLVYLVGRPD AIRRFEAAAA GGVRTASADG GDSGSVDSEI
GDSDTDNTDE TDNTDETDNT DKTEAPENSD RAQRS
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