| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1966 |
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| Symbol | rnhB |
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| ID | 7399918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1965291 |
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| End bp | 1965995 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709037 |
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| Product | ribonuclease HII |
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| Protein accession | YP_002566614 |
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| Protein GI | 222480377 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | [TIGR00729] ribonuclease H, mammalian HI/archaeal HII subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.113979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTACCTCG GCGTCGACGA GGCCGGCAAG GGCCCCGTAC TCGGACCAAT GGTCGCCGCG
GCGGTGCTCG CCGACCCGGT AGCTCTCCCG GCCGATGTGG ACGACTCGAA GCGAATCGCC
CCCTCGCGCC GCGAGTCGAT CGATGCCGAG ATCCGCGCAA CCGACGCCGT CGCTGTCGGC
GTCGCGTTCG TCGAACCCGC CGAGATCGAC CGTCCAGACA CCGACATGAA CACGCTCACG
GTGCGCGGAC AAGCACGGGC GGTTCGGGCC GCGCTGCATG GGGTTGTCGC CGTCGACCTC
GACGAGCCGA TCCGTGTCGT CGCCGACGCC GGCGACACCA GCGAGGCGCG ATTCGCCCGT
CGGCTCGGCG AGTCCGTGGC CGATCCAGAC TCCGATACCA CCGATACCGA ACATCCTGAA
GTCGACGTGT CGGCCGCCCA CGGCGCCGAC GAAGACGACC CGATGGTCGG CGCCGCGAGC
GTCGTCGCGA AGGTGGCTCG CGACGAGCGG ATGGCGGATA TCGACGCCGA TTACCCCGCG
TACGACGGGC TCGGAAGCGG CTATCCGAGC GATCCGGCGA CGCGAAACTT CCTCCGGGCG
TACGTCAACG ACCACGGGAA CGTGCCCGGC TGCGCGCGGC GCTCGTGGGC GACCTGCGAC
GACGTGTTGG CGGCCGCCGA GCAGTCCGGG TTGGACGAGT TTTAA
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| Protein sequence | MYLGVDEAGK GPVLGPMVAA AVLADPVALP ADVDDSKRIA PSRRESIDAE IRATDAVAVG
VAFVEPAEID RPDTDMNTLT VRGQARAVRA ALHGVVAVDL DEPIRVVADA GDTSEARFAR
RLGESVADPD SDTTDTEHPE VDVSAAHGAD EDDPMVGAAS VVAKVARDER MADIDADYPA
YDGLGSGYPS DPATRNFLRA YVNDHGNVPG CARRSWATCD DVLAAAEQSG LDEF
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