Gene Hlac_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1960 
Symbol 
ID7399912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1960055 
End bp1960810 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content72% 
IMG OID643709031 
Producthypothetical protein 
Protein accessionYP_002566608 
Protein GI222480371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.774998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.160551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCG TCGCCGTGCT TGCGAAGCCG CCCCGCGAGG GGCTCGTCGC GACCGGGCTC 
GCGGAGTCGA CGCCGCTGTC GGCCGCCGAA GCCGCCGACC TGTACGAGGC GCTGTTCCGC
GACGCCGTCC TCGCGGTCGA CCGCTCCGGC GGTGAACTCC TCGTCAACTA CCCGGTCAAC
GACGACCTCC CCGCCGAGTA CCGCACCGAC GCCGCTCCCG AGGCCGAGCT TCGAACCCTC
GTCGCCGACA CCCTCGGCGG CACCGAGGAG GTCCGGTTCG AGCGGCAGGT CGGATCGTCG
TTCGGCGCGC GCGCTGGGAA CACCGTTACC CACCTGCTCC GCGAGGAGAA CGCCGACTCG
GTCGCGATCG TCACCCCGCA GGCGCCGATG CTCTCGCGGA CCGTGATCGA CTCGGCCGCG
ATGAAGCTCC GGACGAACGA GGTCGTGCTC GGCCCATCCA CCCGCGGACG CACCTACTAC
GCCGGGTTCA CCGCGCCGAT CGACTTCGAC GGCGCCTTCG AGGCCCCGAA CCTCCCGACG
CTCGCGGCGC GCGGCCGCGA CGCCGACCTC GACGTGGAGT TCCTGGAGTC GTCGCCGTCG
ATGGTCGACG GCGACGACCT CCTCGACGCC GTTCCCCTGC TTCGCGCCCG GTTCGCCGCC
CAGCGCGTCG TTCCCGACTA CACCGCCGCG TTCGTCCACG AGCACGGCCT CGATGTGGTC
GTCGAGGACG GGGACGCGCG GATCGTCCGA GACTGA
 
Protein sequence
MTVVAVLAKP PREGLVATGL AESTPLSAAE AADLYEALFR DAVLAVDRSG GELLVNYPVN 
DDLPAEYRTD AAPEAELRTL VADTLGGTEE VRFERQVGSS FGARAGNTVT HLLREENADS
VAIVTPQAPM LSRTVIDSAA MKLRTNEVVL GPSTRGRTYY AGFTAPIDFD GAFEAPNLPT
LAARGRDADL DVEFLESSPS MVDGDDLLDA VPLLRARFAA QRVVPDYTAA FVHEHGLDVV
VEDGDARIVR D