Gene Hlac_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1953 
Symbol 
ID7399905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1952411 
End bp1952986 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content73% 
IMG OID643709024 
ProductMethyltransferase type 11 
Protein accessionYP_002566601 
Protein GI222480364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.520694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGCC TCGGCGACGT TCGCTTCTTC GACCGGATCG CCCCGCTGTA CGACCGCGTC 
ATGCCGCCGG CCGACGGCGA GACGCTGGCC GCGGGACTCG ACCACGCGAC GCGACCGATC
GACCGACTGC TCGACATCGG CGGCGGCTCC GGGCGCGCGG CGGCCGCGCT GACCGGTCCC
GATATCACCG TCGTCGACGC CTCGCTCGGG ATGCTGGCGC GCGCTCGGGA GCACCGCGGG
CTCTCGGGCG TCGCCGGCGA CGCGGGGCGG CTTCCGTTCC GCGACGGATC GGTCGACGCC
GCAATGGTCG TCGACGCGTT TCACCACCTG CCCGATCAGG CGGCCGCGAT CGGGGAAGCT
GCGCGTGTGA TCGCCCCTGG CGGCGCGCTC GTGATCCGGG AGTTCGACCC GACGAACCCG
CTCGGCAGAG TCCTCGTCGC GAGCGAGCAC GCGATCGGGA TGGAGTCGCG GTTCCGTTCC
CCAGACGATC TCGCCGCCGC GCTCGCCGAC GCCGGGTTCG ATCCGCGGGT CGTCGACCGC
GGCTTCGGCT ACACGGTCGT GGGCGTGCGG GAGTGA
 
Protein sequence
MYGLGDVRFF DRIAPLYDRV MPPADGETLA AGLDHATRPI DRLLDIGGGS GRAAAALTGP 
DITVVDASLG MLARAREHRG LSGVAGDAGR LPFRDGSVDA AMVVDAFHHL PDQAAAIGEA
ARVIAPGGAL VIREFDPTNP LGRVLVASEH AIGMESRFRS PDDLAAALAD AGFDPRVVDR
GFGYTVVGVR E