| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1916 |
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| Symbol | |
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| ID | 7399868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1919587 |
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| End bp | 1920237 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708987 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002566564 |
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| Protein GI | 222480327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG TCCAGTTCGC GGCGGCGTAC CCGGAGCGGC TCGTGCATCC GCTTCACCGT
CGGGTCATCG AGCCCGGGCC GGTGACCCGT GCCGAGCTGT TGACGTGGAG TCCCACTGCG
GACGCGACGA CGCTGTTCTG GTGTGACGCG GACGCAGACG CGACGGCGTC GGTCGTTCGG
GTCGTCGACT CGCTCGTGGA GAAGGAACTC GTCGAAGACG GGGACGGGAC GTACGCGTTC
CTCCGACAGG ACGGCTACGA GTTCGCGCCG GCGGTGCTTG ACGCGATCGC GGCCGCACAC
GTGGTCTTTC TCCCGCCGGT CGTCTTTCTG GACACGGGCG ACGTGCGGTT CGAGGCGGTC
GGAGAAGCGG CGGCGCTCGG CGCGTTCCAC GAGGCGCTCA CCGACCTCGG CGACGTTGCC
ATCGAGCAGG TCCACGAGTT CGAGCGGACG GCGTCGCCGT CGCGGCTCAC CGATCGGCAG
CGAGACGCGT TGGAGGCGGC AGTCGCGGCG GGGTATTACG AGATACCCCG CGACGGGGCC
GTCGAAGACG TCGCCGCGGC CCTCGACTGC TCGACGAGCA CGGCCGGCGA ACTGGTGCGG
AAGGCCGAGG CAGCGGTGAT CCGCGAGTTC GTCGCGGCCG GCGGTTTATA A
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| Protein sequence | MKRVQFAAAY PERLVHPLHR RVIEPGPVTR AELLTWSPTA DATTLFWCDA DADATASVVR
VVDSLVEKEL VEDGDGTYAF LRQDGYEFAP AVLDAIAAAH VVFLPPVVFL DTGDVRFEAV
GEAAALGAFH EALTDLGDVA IEQVHEFERT ASPSRLTDRQ RDALEAAVAA GYYEIPRDGA
VEDVAAALDC STSTAGELVR KAEAAVIREF VAAGGL
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