| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1888 |
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| Symbol | tmk |
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| ID | 7400082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1888806 |
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| End bp | 1889399 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708959 |
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| Product | thymidylate kinase |
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| Protein accession | YP_002566536 |
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| Protein GI | 222480299 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.339861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.526884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGATCA CGCTGGAGGG GCTCGACGGC AGCGGAAAGA CCACCGTCTG GGAGGCGCTC
CACGACGTCT ACCCCGACGC GACGTTCACC CGCGAGCCCA CCGACAGCTG GTATGGCGAG
GCGGTCGACC GGTCGATCGC GGCCGACGAC GCCGACCCGC TCGCGGAGCT ATTCCTGTTG
ACGGCCGACC ACGCGGACCA CCTCTCGGGA ACGATCGAGC CCGCCCTCGC CGACGGCGAC
CTCGTGATCT CCGACCGCTA CTCCGACTCC CGGTTCGCCT ATCAGGCGGC GACGCTCGCC
GCCAGCGATG TCGACATCGA CCGCCCACTA GAGTATATAA AGGGAATCCA CGCCGCCTTC
TCGCGGCCGC CGGATGCGAC GATCTACCTC GATCTGGACG CCCGCGAGGC AGCCGAGCGC
GCAGGCCGGA CGAACAAATT CGAGCAGGAC GGCTACCTCG CTGCGGTCCG GAAAAACTAC
GAGCGACTGA TCGACGCCGA GCCGGACCGG TTCGTCCGCA TCGACGCCTC GCAGTCGCCG
GAGGCGGTCA TCGCGCGGGT CGAGGAGGTT CTGTCGGAGT TGCTGGGCGA GTAG
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| Protein sequence | MLITLEGLDG SGKTTVWEAL HDVYPDATFT REPTDSWYGE AVDRSIAADD ADPLAELFLL
TADHADHLSG TIEPALADGD LVISDRYSDS RFAYQAATLA ASDVDIDRPL EYIKGIHAAF
SRPPDATIYL DLDAREAAER AGRTNKFEQD GYLAAVRKNY ERLIDAEPDR FVRIDASQSP
EAVIARVEEV LSELLGE
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