Gene Hlac_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1875 
Symbol 
ID7400068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1880262 
End bp1880555 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content62% 
IMG OID643708945 
ProductChorismate mutase 
Protein accessionYP_002566523 
Protein GI222480286 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0566937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA CACCGAACTC CGAGGACCGA AGCCTCGACG AACTGCGACG CGAGATCGAA 
GACATCGACC GCGAGATCGT GGAACTGATC GCCCGACGGA CCTACGTCGC CGACACGGTG
GCGGCCGTGA AGGAGGAGCG CGACCTCCCG ACGACCGACG AGGGGCAGGA GGAACAGGTA
ATGGAGCGCG CCGGCGCAAA CGCCGAGCGG TTCGACGTCG ACGCCAACCT CGTGAAAGCG
ATCTTCCGGC TGTTGATCGA GTTGAACAAA GTTGAACAAC GAGAGAGCCG GTAG
 
Protein sequence
MSDTPNSEDR SLDELRREIE DIDREIVELI ARRTYVADTV AAVKEERDLP TTDEGQEEQV 
MERAGANAER FDVDANLVKA IFRLLIELNK VEQRESR