Gene Hlac_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1870 
Symbol 
ID7400063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1877348 
End bp1877704 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID643708940 
Producthypothetical protein 
Protein accessionYP_002566518 
Protein GI222480281 
COG category[S] Function unknown 
COG ID[COG3462] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0355867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA GTGACGGATT TGACCGACTC CTCGTGCTCG TTGTCGCCAT CGTGATACTC 
CTTCCAGTTT TGATGATGGT GTTCGCATGG CCGATGATGA CGATGTGGGG TAGTGGACAC
ATGTGGGACG GCGGGATGTG GAATGGGGCA GGCGCATCGT GGATGTGGCT TGTGATGTGG
ATCGTTCCGC TTGTGATATT TCTTGGTGGA GGATACCTCC TGTATAGAGT GTTTAACCCT
CCCAATAGCA ATGATACGGA CGCCGCACTC GAAGAACTGC GCCTCACCTA TGCACGGGGA
GACCTCTCCG AGGAGGAATT CGAACAACGG CGAGAACGCC TCGATCGTTC GGAGTGA
 
Protein sequence
MAQSDGFDRL LVLVVAIVIL LPVLMMVFAW PMMTMWGSGH MWDGGMWNGA GASWMWLVMW 
IVPLVIFLGG GYLLYRVFNP PNSNDTDAAL EELRLTYARG DLSEEEFEQR RERLDRSE