Gene Hlac_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1852 
Symbol 
ID7400044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1857489 
End bp1858160 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID643708921 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002566500 
Protein GI222480263 
COG category[K] Transcription 
COG ID[COG1777] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.211312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCG CGGTACTGCT TGATCTCCTT GGGAACGAGA ACCGGCGACG CATCCTCCGG 
CTGCTCGCCA CCAAGCCCTG TTACGTCACG GAGATCTCGG AGTACCTCGA CGTGAGCCCG
AAAGCGGTGA TCGACCACCT GCGAAAGTTG GACGAGGCCG GTCTCGTCGA GTCGACCACC
GACGACCAGC GCCGCAAGTA CTTCCGTATC GCTCAGAGCC TCCGACTGGA GGTAAGTGTC
TCTCCGTACG GCTTCGGCGC GAAGAGCGCC TATCCCGCGA AGAACAGCTT CGACATGGCG
TCACGGTGTC AGCATCTTTC GATAGAGATC CCCGACGACT CCGGGTCGTC GAGCGATTTG
GCCGACCTCG CCGGCGAGTA CGGCCGGCTC CAGGACCTCG ACCGCGAACT CTCGCTGGCC
CAGCGGTGGG TACAAGGGCG CGTCGAGGAC ACCCTGGCGG AGATCGACGA ACGTCTCGGC
ACCGAGTCGG ACAGCCGCTT TTTCGCGGCG GTGCTCGACG CGCTGGTCGA GACCGACGGC
ACACCCGCGG CGGTCGCCAA CGAGGTCGGC GCCCGCGAGG AGACGGTGGC GGACGCCCTC
CACCAGCTCG CCGACGTGGG GGTCGTCGCC CGCGACGGCT CCGCTGACGT GGATCACTAC
CGCATTCGGT AG
 
Protein sequence
MDSAVLLDLL GNENRRRILR LLATKPCYVT EISEYLDVSP KAVIDHLRKL DEAGLVESTT 
DDQRRKYFRI AQSLRLEVSV SPYGFGAKSA YPAKNSFDMA SRCQHLSIEI PDDSGSSSDL
ADLAGEYGRL QDLDRELSLA QRWVQGRVED TLAEIDERLG TESDSRFFAA VLDALVETDG
TPAAVANEVG AREETVADAL HQLADVGVVA RDGSADVDHY RIR