Gene Hlac_1821 details

Gene Information

• Locus tag: Hlac_1821
• Symbol: rpl13p
• ID: 7400013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorubrum lacusprofundi ATCC 49239
• Kingdom: Archaea
• Replicon accession: NC_012029
• Strand: +
• Start bp: 1834898
• End bp: 1835347
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643708891
• Product: 50S ribosomal protein L13P
• Protein accession: YP_002566470
• Protein GI: 222480233
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01077] ribosomal protein L13, archaeal/eukaryotic

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTCTCG CAAAGATCGA CGCGGACGTC GTCGTCGACG CCCGGGACTG CATCCTCGGT 
CGCGTCTCGT CGAAGGTCGC CCAGCGCGTC CTTGACGGCG AGACGGTCGC CGTCGTCAAC 
GCCGAGCGCG CGGTCATCAC CGGTAACGAG GAGGCGACGA TGGAGACGTA CCACACTCGC 
GCGGAGCTCG GCTCCGACAG CGGGCCGTAC TACCCCAAGC GCCCCGACCG AATCTTCAAG 
CGTGCCATCC GCGGCATGCT ACCGTACAAG ACGGAGGACG GCCGCGAGGC ACTCTCGAAC 
GTCCGCGTCT ACGTGGGCAA CCCCTACGAG CGCGACGAGG ACGCCGAGAC CGTCGTTCTC 
GACGGCACCT CGCTCGACCG CCTCTCGAAC ATCAAATTCA CGACGCTCGG GGACATCTCC 
GAGTCTCTGG GAGCCAACGT CACATGGTAA 

 

Protein sequence

MSLAKIDADV VVDARDCILG RVSSKVAQRV LDGETVAVVN AERAVITGNE EATMETYHTR 
AELGSDSGPY YPKRPDRIFK RAIRGMLPYK TEDGREALSN VRVYVGNPYE RDEDAETVVL 
DGTSLDRLSN IKFTTLGDIS ESLGANVTW