Gene Hlac_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1820 
Symbol 
ID7400012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1834548 
End bp1834901 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content61% 
IMG OID643708890 
Product50S ribosomal protein L18e 
Protein accessionYP_002566469 
Protein GI222480232 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.736031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCA AGACGAATCC GAAACTACAG AACCTCATCG CCGATCTGAA GTCGGTCTCG 
CGCGATTCCG GTGCCAACGT ATGGCAGGAC ATCGCCGCCC GACTGGAGAA GCCACGGCGC
ACGCACGCTG AGGTCAACCT GGGCCGCATC GAACGGTACG CTCAGGAAGA CGAGACGGTC
GTCGTCCCCG GCAAGGTGCT GGGCAGCGGT GTGCTCGAAA AGAACGTCAC CGTCGCCGCC
GTCGACTTCT CGGGCACTGC CCGCACGAAG ATCGACCAGG CCGGCGAAGC GGTGTCGCTT
GAACAGTTCG TTGAACAAAA TCCCGAAGAG AGCAACGTCC GGGTGATTCG ATGA
 
Protein sequence
MSSKTNPKLQ NLIADLKSVS RDSGANVWQD IAARLEKPRR THAEVNLGRI ERYAQEDETV 
VVPGKVLGSG VLEKNVTVAA VDFSGTARTK IDQAGEAVSL EQFVEQNPEE SNVRVIR