Gene Hlac_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1809 
Symbol 
ID7399683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1824342 
End bp1825463 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID643708876 
Producthistidine kinase 
Protein accessionYP_002566458 
Protein GI222480221 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTC GGCCGGGAGT CGCGTATCGA CGACCGGACG GCGACCCGAC CCAATTTACC 
GTCGAGGCCG CGGGTGAGTC GCGTCTCAAC ACCGACGCGC TGCCGCAGAC TGACTGGCTC
CGAGTCGTCG AACCAGACGA CAGAGACCGG CTTCGCGACG CGCTCGACGG GGACGCGGTC
GACGTGACGT ATCGGCTCAC GGTCGACGGC GAGTCCGCGT GGGTCCACGA GCGCGGCGCG
CGCGACGAGA GCGGTGATAT CGTCGGCTAC CTCTTCTCTG CCGACGATCG GGTCGAGCGT
CGTAAACAGC TCGAACAGCA GCGAGAGCGG CTAGAAGAGT TCGCTAGCGT GGTCTCTCAC
GACCTGCGGA ATCCGCTCTC CGTCGCCGTC GGAAACATCG AACTGGCCCG GGAGTTCGAC
GGCGAGGAGG TCGACGAGCG GTTGGACCGC GCGCACGACG CGCTCGACTG GATGGACGAC
CTCATCTCGG ATGTCCTCGC GCTCGCCCGC GAGGGCCGAT CGGTCGAGGA GACTGCAACC
ACCGATCTCC GGAGTGTCGT GGATCAGGCC TGGCGGACGG TCGGCGCCCC CGAAGGCGTC
GTCCTCGCCG TCGACGAGCC CCTGCCGCCC GTCGAGTGCG ATCGGAGCCG GCTCCGACAG
GCGTTAGAGA ACCTCTTTCG GAACGCGATC GAACACGGGA CGCCGGAAAC GCTCTCCGTC
GATCCCGTCG AACAGAACGC CGGTAGATCG ACCGACAACA TCGATCCCGA GACGTTCGGC
GGAGGTATCT CCGAATCCGG GATCGTCGAT TTCGAGAGTG CGGCCGACTC CGACCCGTTG
CTCCGGGTCT TCGTGGGGCG GCTACCGAAC GGATTCTACG TCGCCGACGA CGGCACGGGG
ATCGACCCGT CAGAGCGCGA CGCCGTGTTC GATCCGGGCC ACTCGACCGA GAGGGACGGG
ACGGGATTCG GGCTCTCCAT CGTCGAACGC ATTGCGGAGG CCCACGGCTG GGAAGTTTCG
GTCACCGAGA GCCGTACGGG CGGCGCTCGT TTCGAGTTCA CCGGCGTCGA CCTCGTTGAC
GCCGAGGAAA CCGACACCGT TGGCACCGTG CCAAGCGAGT GA
 
Protein sequence
MDRRPGVAYR RPDGDPTQFT VEAAGESRLN TDALPQTDWL RVVEPDDRDR LRDALDGDAV 
DVTYRLTVDG ESAWVHERGA RDESGDIVGY LFSADDRVER RKQLEQQRER LEEFASVVSH
DLRNPLSVAV GNIELAREFD GEEVDERLDR AHDALDWMDD LISDVLALAR EGRSVEETAT
TDLRSVVDQA WRTVGAPEGV VLAVDEPLPP VECDRSRLRQ ALENLFRNAI EHGTPETLSV
DPVEQNAGRS TDNIDPETFG GGISESGIVD FESAADSDPL LRVFVGRLPN GFYVADDGTG
IDPSERDAVF DPGHSTERDG TGFGLSIVER IAEAHGWEVS VTESRTGGAR FEFTGVDLVD
AEETDTVGTV PSE