Gene Hlac_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1802 
Symbol 
ID7399676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1817629 
End bp1818084 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID643708869 
Producthelicase 
Protein accessionYP_002566451 
Protein GI222480214 
COG category[R] General function prediction only 
COG ID[COG1202] Superfamily II helicase, archaea-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTTCA CCGACAAGAT CTACGTGAAG AACCACCGGC AACTCGCCTC CCAACTGGAG 
ACGAACATCC CGAAAGGGGC CTTCGCCGGC GCGACCCTCG ACATGCTGTT TACCGGCGAC
GGGCTCTCGA AGCTCGACTC GACGACGCAG GACCGAATCT TGGACTTCGC GGAGGACTTC
CTCGACTGCG ACTGTCAGGC GAACCCCTAC TGCGGCTGCG CGGAGGAGAA GTTCATGCGA
TACGTGTTGG AGCTTCGGGC TGAGGGACTC GGCCCGCAGG CGATCGTGGA CGTGATGAGC
GACGACTACA TGGTGTACGC GTACACCGGC GACGTGCTCT CGTTCCTCGA CAACTCGGTG
CGGCAGCTGG AGGCGGTCGA GACCCTCTCC GACGTCGAGG GCAACGAGGA AATGTCGGAG
CGAGCGAGGC GAGCGAAGCG GGAACTGTCG GGGTGA
 
Protein sequence
MAFTDKIYVK NHRQLASQLE TNIPKGAFAG ATLDMLFTGD GLSKLDSTTQ DRILDFAEDF 
LDCDCQANPY CGCAEEKFMR YVLELRAEGL GPQAIVDVMS DDYMVYAYTG DVLSFLDNSV
RQLEAVETLS DVEGNEEMSE RARRAKRELS G