Gene Hlac_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1748 
Symbol 
ID7399619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1764177 
End bp1764644 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content59% 
IMG OID643708815 
Productputative transcriptional regulator, AsnC family 
Protein accessionYP_002566400 
Protein GI222480163 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0810392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGATAG ACGCTCGCGG AGCCTCCGAC ACGAACATCG CGGAGGAGAC GGACGTAACC 
GGGACGACCA TCCACAACCG AATCGAGCAA CTGGAGGAGA AGGGCATTAT CACCGGCTAC
AATCCGGAAA TCGACTACGA GCAGGCGGGG TATCCGATGC AAGTGTTGTT CATCTGCTCG
ACGGACCTCT CCCGCCGGTC GGAGATGGCG GAGAAAGCTC TCGAAGTTCG GGGTGTCGTC
AACGTCCGGG AGATGCTGTC CGGCGAGGAG AACCTCCACA TCGAGGTCGT CGCCGAATCG
ACATCCGAGA TTGAGGAGAG TACCGACCAG TTAGACGAGC TCGGCCTGCG AATCGTGAGT
AGCAACATTC TGGCAGAAGA ACACATTCAG CCGTGGAACC ACTTCCATCA GGAGTTCGCC
GGCGAGGACG CCGATGCGCC CGAGGAGATC GGTTCGTCCG AAGAATAG
 
Protein sequence
MQIDARGASD TNIAEETDVT GTTIHNRIEQ LEEKGIITGY NPEIDYEQAG YPMQVLFICS 
TDLSRRSEMA EKALEVRGVV NVREMLSGEE NLHIEVVAES TSEIEESTDQ LDELGLRIVS
SNILAEEHIQ PWNHFHQEFA GEDADAPEEI GSSEE