| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1616 |
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| Symbol | |
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| ID | 7399565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1635618 |
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| End bp | 1637795 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708682 |
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| Product | nucleic acid binding OB-fold tRNA/helicase-type |
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| Protein accession | YP_002566271 |
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| Protein GI | 222480034 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1107] Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.837282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCCT GTATCATTTG TGGCGTCGAC ATCGACGGTG GCGGTCGCAT CTGCGATCCA
CACCAAGAGG ACGTTGTGTT CGACTTCCGA GGCGACTCCC CGAAGCAGCT CGTTCCGAAC
CGATTCTACC GCGGCGTCGT CGACGGCTAC GCCGAATTCG GCGTGTTCAT CGACCTCTCG
CCGGGAGTGA CCGGGCTCCT CCACCGGTCG GAGCTCGACC GACGGCTCGA TAGCCTCGGC
TGGGAGCCGG GCGACGAGGT GTTCGTGCAG GTGAAAGGCG TTCGTGACAA CGGGAACATC
GACCTCGCGT GGTCGATCCG GCAGGCCGAC CGCGAGTTCC GCGGCGTGCT CGTGCAGGAC
GGCGACACCG AGCACCTTCC TGAGGAGGGC GGCGAGGAGT CAGACGCGGA AGCCGACGCG
GAGCCGGACG AACTCGACGT GGCCGACGAT GAAACAGCGG ACGCGAGCGA CGACGAATCA
GCCGATGTCG ATGAGGCTGC CGAGCCCGAC GAGGGCGACG GGGACGTCTC CGCTGAGGCT
GACGAGGTCG CTAAGGCTGA CGAAGCTGAC GACGAAGGCG GCGCTGACGA AACCGACGAG
GGCGACGAAT CCGACGCTGA CGAGGGTGAG AACGAATCCG GCGCTGACGA ATCCGCCGAG
GACGACGACC TCGACGACGA GCGCGAGCGC GTCGAGATCG GTACCCTCAC CGACGCCGTC
GGCGATGCGG CGCGGATTGA CGGCGAAGTT GTCAGCGTTC GACAGACCGG CGGCCCGACC
GTCTTCGAGG TTCTCGACGA GACGGGTGTC GTCGACGTGG CCGCGTTCGT CGAGCCAGGT
GTCCGCGCGT ACCCGGACAT CGAGATCGGC GACGCGGTGC GGATCGACGG TGAGGTCGAG
AGCCACCGGG GCGACGTGCA GGTCGAGTCC GAGGCGCTCG TCCTCTTGGA GGGCGAGGAG
GCCGAGACCG TCCGCCGTCG ACTCGCCGAG GCGCTCACCG CCGAGGCCCG TCCGGAGGGG
CTCCAGCCGC TCGCGGGCGA CGAGACGGTC GCAGAGCTCG CAGACGGGCT GCTCGACGCC
GCGGAGGCGA TCCGCCGCGC GGTTCTCGAA TCGCGGCCGA TCGTCGTGCG CCACCCGGCC
ACCGCCGACG GCTACGTCGC CGGTGCCGCG GTCGAGCGCG CCGTTCTTCC GCTGATCCGC
GAGGAACACG CGAAAAGCGA CGCGGAGTAC CACTACTTCA CCCGCCGGCC GCTCGACGAC
CCGGTGTACG GGATGGACGC GGCGACGAAC GACGCGACCC GCATGCTGCA GGACCGCGAC
CGTCACGACG AGCAGCTCCC GCTGTTCCTG CTCGTCGGCA CCGGCTCCAC AACTGAGTCT
GCAGACGGGA TCGACCTGCT GTCCGTCTAC GGCGTCAACG CGGTCGTCGT CGACGCCGAG
GTCGCCGATC CCGAGACGCG CGAGGCCGTC GACACGCTCG TCTCGCCCGA GATCGACGGG
GTCGACGCCG ACCTCTCGAC GGGCGCGCTC GTCGCCTCGC TGGCCTCCGC GGTCAACGAC
GAAGTTCGAA CGGACCTCCG GCACCTGCCC GCGGTGAGCT ACTGGGCGGA GACCCCCGAC
CGCTACGTCG AACTCGCCCG CGATGCGGGC TATGACGCCG AGCGCGTCGC GGAGCTCCGC
GAGGCGGTCG CCTTAGAGGC GTACTATCAG TCGTATCAGG ACAAACGCGA ACTCGTCGCT
GATCTCCTCT TCGAGGACAG CGGCAACCTC GCGGCCCACG TCTCCGAGCA GTTCCGCGAG
AAGCTGGAGA CGGAAATCAA AACCGCGACC GAGAACGTCG TCACCGAGGC GGTCGACGGC
GTCGAGTTCG CCGTTCTCGA CACCGACGGC TACACCCATC GCTACGACTT CCCGCCGACG
CCGCTCCTGC TCGACGACCT CCACCGCCGG AACGCGAACG GCGAGGCGTA CGCGACGGTC
GGAATCGGTA TGGACGAGCT ATACCTCCGG ACGACCGCAG ACGTGTCCGT CCGCGACGTG
GCCGAGCGCA CCGCCGAGCT GGCGCCCGGC GCCGACGTCA CCACCGCTGG CCTCCGCGAG
GGGAAAATCG AGTTCCTCTC CGGCGAGCGT GACGCGGTCG AGGACGCGAT CGTCGCGGCC
GTCGCCGAGG CGTTCTGA
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| Protein sequence | MGSCIICGVD IDGGGRICDP HQEDVVFDFR GDSPKQLVPN RFYRGVVDGY AEFGVFIDLS
PGVTGLLHRS ELDRRLDSLG WEPGDEVFVQ VKGVRDNGNI DLAWSIRQAD REFRGVLVQD
GDTEHLPEEG GEESDAEADA EPDELDVADD ETADASDDES ADVDEAAEPD EGDGDVSAEA
DEVAKADEAD DEGGADETDE GDESDADEGE NESGADESAE DDDLDDERER VEIGTLTDAV
GDAARIDGEV VSVRQTGGPT VFEVLDETGV VDVAAFVEPG VRAYPDIEIG DAVRIDGEVE
SHRGDVQVES EALVLLEGEE AETVRRRLAE ALTAEARPEG LQPLAGDETV AELADGLLDA
AEAIRRAVLE SRPIVVRHPA TADGYVAGAA VERAVLPLIR EEHAKSDAEY HYFTRRPLDD
PVYGMDAATN DATRMLQDRD RHDEQLPLFL LVGTGSTTES ADGIDLLSVY GVNAVVVDAE
VADPETREAV DTLVSPEIDG VDADLSTGAL VASLASAVND EVRTDLRHLP AVSYWAETPD
RYVELARDAG YDAERVAELR EAVALEAYYQ SYQDKRELVA DLLFEDSGNL AAHVSEQFRE
KLETEIKTAT ENVVTEAVDG VEFAVLDTDG YTHRYDFPPT PLLLDDLHRR NANGEAYATV
GIGMDELYLR TTADVSVRDV AERTAELAPG ADVTTAGLRE GKIEFLSGER DAVEDAIVAA
VAEAF
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