| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1609 |
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| Symbol | |
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| ID | 7399558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1628411 |
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| End bp | 1629142 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708675 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002566264 |
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| Protein GI | 222480027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.680269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.358173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGAC TAACGTTGCG GCTCGACTTC CCGAGCGGCT CGTGGCTCGG TGACGTGTCT
CGGGCTCGAC CCGACGCGAC CCTCCGCACG ACCGAGACCG TCGCCGCCGT CGAGGGAGAC
GTGACCGCGC TTACCGTCAC CGGCACCGAC CGCGCGGAGA CGGTGGAGGC GCTGCGCGCC
CACGACCGCG TGGATCGGAT CGACATCGTC GATCGGACCG GTCCCGCGAC GAGGGTCCGA
GTCGTCGCAC CCGCGCCGCC GCCGCACGTC GCGGCCGCGC GAGAGGTCGG GATACCGATC
GAGGATCCGG TTGCGGTGAC GGACGGGCGC GCGACGCTCG ACATCGTCGA TGACCGCTCC
CGGCTCACCG CCTTCGGGCG ACGGCTCACG GCCGAGGGCG TCACTGTGGG GATCGAGGCG
AGCGACGCCG ACGAGGAGCC GATCCTCACC GACGCCCAGC GCGACCTCGT TCTCGCCGCC
GTCGCCGCCG GGTACTACGA CACTCCGCGA GAGTGTACGC TCACGGACCT CGCCAAGGCG
CGCGGCCTCG CGAAGTCGAC GTGCAGCGAG ACGCTCCACC GGGCAGAGGG CCGGGTGTTG
CGACGGTTCG TGGCGGGCGA GTTCGACGAC GAGGACAGCG AGACAAGCGT CGGGAAAGGG
ATCGGTGACG AGTCAGAGCG GGAGCCCGAC CGGGATGGCC ACCACAGAAC CGTGACGGCG
CTTGGCACTT AA
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| Protein sequence | MTRLTLRLDF PSGSWLGDVS RARPDATLRT TETVAAVEGD VTALTVTGTD RAETVEALRA
HDRVDRIDIV DRTGPATRVR VVAPAPPPHV AAAREVGIPI EDPVAVTDGR ATLDIVDDRS
RLTAFGRRLT AEGVTVGIEA SDADEEPILT DAQRDLVLAA VAAGYYDTPR ECTLTDLAKA
RGLAKSTCSE TLHRAEGRVL RRFVAGEFDD EDSETSVGKG IGDESEREPD RDGHHRTVTA
LGT
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