Gene Hlac_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1600 
Symbol 
ID7399549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1617752 
End bp1618174 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content70% 
IMG OID643708667 
ProductRhodanese domain protein 
Protein accessionYP_002566256 
Protein GI222480019 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00548753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGGCG AGATCGACCC CGACGAGCTG GCGGCGCTGC TCGACGACGA GGAGACCGAG 
ACCGTCGACG CAGACGACAC CGACCTCCGG ATCGTCGACA TCCGCGATCG CCGCGCGTTC
GACCGCGGGC ACATTCCCGA CAGCGAGTGC ATTCCCTTCC CGGAGCTGAC GACCCGTATC
GCGGAACTGG AGGGCGCCGC TCGGATCGTC ACCGTCTGCC CCCACGGGGT CGCCAGCCGG
CAGGCGGCCC AGCTCATCGG AAGCTACGCA GGGACCCAAA ATGTGCGCGT CGACAGCCTC
CGCGGCGGCA TCGAGGCGTG GGAGCGTGAC GTGGGCGCGT TGGTCCCGAC AGCGGCAGAC
GGAGCCGACG GCGGAACGGA CCCGACCCCA GACGCCGACG AAGGCCCGGA CGCCCCCTTT
TAA
 
Protein sequence
MDGEIDPDEL AALLDDEETE TVDADDTDLR IVDIRDRRAF DRGHIPDSEC IPFPELTTRI 
AELEGAARIV TVCPHGVASR QAAQLIGSYA GTQNVRVDSL RGGIEAWERD VGALVPTAAD
GADGGTDPTP DADEGPDAPF