| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1582 |
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| Symbol | gabD2 |
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| ID | 7401515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1602552 |
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| End bp | 1604207 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643708648 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002566238 |
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| Protein GI | 222480001 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0334627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGA CGAATTCTCC CACCGCGCTC GACGACGCTC CGAGTCTCGC GGCGCGGCGG
CTCGACGATC TCGCTGATCG CGTGGCGCGT TCGAGTTCCG CGGACGCCGA CGGCGACGCG
GACGGGCCGG CCGCCGGGAC TGACGCGATC GACGTGTTCG CTCCGGCGAC CACCGAGCGA
ATCGGCTCGG TGCCAGCCTG CGAGGCGAGC GACGTCGACG CCGCGGTCGA GCGCGCCCGG
GAGGCGCAGG CGGAGTGGGC GGCGACGCCC GCGAGGGAGC GCGCGGCGGT CCTCGACCGG
TTCGGCGACC TCGTGCTCGA CCGCCATGCA GAGCTGCTCG ACCTCCTCCA GCTGGAGACC
GGGAAGTCGC GCCGAACCGC GGTCGAAGAG TTGTTCGACG TACCGATGGG ATGCGGCTAC
CTCGCCGAGA CAGCGCCCGG CGTCCTCGCC GACGAGCGGC GCGCGGGCGT CGCACCGGGG
ATGACCACTG CGACCGTCAC CTACGATCCG GTCGGCGTCG TCGGCGTGAT CTCGCCGTGG
AACTACCCGC TGACGCTGTC GATGGCGGAC GCGCTCCCCG CGCTGGTCGC GGGCAACGCG
GTCGTGCTTA AACCCGACGA GAAGACGCCG TACGGCGCGC TCGCGCTCGG CGAGCTGCTG
GAGGTCGCGG GTCTCCCGGA CGACCTGTTC CAAGTTGTCA CAGGTGACGG ACCGACCGTC
GGTCCCGCGC TCATCGACGC GGTCGACTAC GTCGCGTTCA CCGGGAGCAC CGAGACCGGC
CGGATCGTGG CCGAGCGCGC GGGACGGAAC CTCATCGACT GCTCGCTGGA GCTCGGCGGC
AACAACCCCC TCATCGTCCT CGACGACACC GACGTCGACG AGGCGGCCCG CGGCGCGGTA
CAGGCCTGCT TCTCGAACGC TGGGCAGCTC TGTCTGTCGG CGGAGCGAAT CTATGTCGTT
GAGTCGGCCT ACGACGAGTT CGTCGACGCG TTCGTCCGCG AGACGGAACG GCTCACGCTG
GGGACCGGTT ACGACTACGA CGCCGAGGTC GGCTCGCTCA TCGACGCCGC CCAGCTCGAT
CGGGTCCAGA ACCACGTCGA CGACGCGCGG GAGCGCGGCG CGACCGTGCT GACGGGCGGC
CGCGCCCGTC CCAACGTGGC GCCGTACTGC TACGAGCCGA CGATCCTGAC CGACGTGGAG
CCGGATGCGA CCGTCGCGTG CGAGGAGACG TTCGGTCCAG TGGTCTCCGT GGCACCCGTT
CCAGACGCCG ACGCCGCGGT CGCAGCCGCC AACGACTCCC CGTACGGGCT CAACGCGAGC
GTGTGGACGC GGGACCGGGA TCGGGGCGCC GAAATCGCCC GCGATATCGA CTGCGGCACC
GTCAACGTCA ACGACGCCTT CCTCGCGACG TGGGGCGCCG TCGACGCGCC AATGGGTGGT
TTCGGCGACT CCGGGATGGG CCGCCGCCAC GGGCCCGAGG GGATCCGGCG GTACGTCGAG
TCCCGGACGA TCGGGGTCTC GCGCGTCGGT CCCCTCACCT TCCCGGACCG AATCCCGATC
GGCTGGTTCG TCCGCGGCGC GTTCGCGGCG CTCTCGCTCG GGCGGCGGGC GAGCCGCGGC
GTGCGGCGGC TGAAAGAGCG GATTCGGCTG CGATAG
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| Protein sequence | MSSTNSPTAL DDAPSLAARR LDDLADRVAR SSSADADGDA DGPAAGTDAI DVFAPATTER
IGSVPACEAS DVDAAVERAR EAQAEWAATP ARERAAVLDR FGDLVLDRHA ELLDLLQLET
GKSRRTAVEE LFDVPMGCGY LAETAPGVLA DERRAGVAPG MTTATVTYDP VGVVGVISPW
NYPLTLSMAD ALPALVAGNA VVLKPDEKTP YGALALGELL EVAGLPDDLF QVVTGDGPTV
GPALIDAVDY VAFTGSTETG RIVAERAGRN LIDCSLELGG NNPLIVLDDT DVDEAARGAV
QACFSNAGQL CLSAERIYVV ESAYDEFVDA FVRETERLTL GTGYDYDAEV GSLIDAAQLD
RVQNHVDDAR ERGATVLTGG RARPNVAPYC YEPTILTDVE PDATVACEET FGPVVSVAPV
PDADAAVAAA NDSPYGLNAS VWTRDRDRGA EIARDIDCGT VNVNDAFLAT WGAVDAPMGG
FGDSGMGRRH GPEGIRRYVE SRTIGVSRVG PLTFPDRIPI GWFVRGAFAA LSLGRRASRG
VRRLKERIRL R
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