Gene Hlac_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1573 
Symbol 
ID7401506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1590957 
End bp1591406 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID643708639 
ProductUspA domain protein 
Protein accessionYP_002566229 
Protein GI222479992 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGATC AGATACTACT CCCCACGGAT GGCAGCAAGG GCGTCGACCG AGCCATCGAC 
CACGCGATCG ACGCCGCCGA GCGCTACGGC GCGACCCTTC ACGTGCTGTA CGTCGTCGAC
AGCGACGTGG TCAACGCGTA TTCTGGCGAC GAGTTCGTTG ACGGATCGGA AGGCGCCTCC
GAGACGCTGG AAGAGCGCGG CCGCGAGGCG CTCGACGAGG TGGCCTCGCA CGCCGCGGAC
GCGGGCGTCG ACGTGGTGAC CGAGCTGGTG TACGGCGTCC CCCACGAGGA GATTCTCGGC
TACATCAACG ACGAGGATAT CGACCTCACG GTGATGGGAT CGAAGACCCG ATCGGGGAAC
TACCGGCGGA TGCTCGGCTC CGTCACCGAG CGCGTCTCCC GACAGTCGAC CGCGCCAGTG
AGCATCGTGA AGACGACGGT TTCGGAGTGA
 
Protein sequence
MYDQILLPTD GSKGVDRAID HAIDAAERYG ATLHVLYVVD SDVVNAYSGD EFVDGSEGAS 
ETLEERGREA LDEVASHAAD AGVDVVTELV YGVPHEEILG YINDEDIDLT VMGSKTRSGN
YRRMLGSVTE RVSRQSTAPV SIVKTTVSE