Gene Hlac_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1550 
Symbol 
ID7401482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1572276 
End bp1572509 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content62% 
IMG OID643708617 
Producthypothetical protein 
Protein accessionYP_002566208 
Protein GI222479971 
COG category[S] Function unknown 
COG ID[COG4309] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAC TCGACGTTCG CGAAATTTCG CCGGTGAACC GCCACGAGAA GATACACGAG 
GAGTTCGAGG GGATGGACCC GGGCGAGACG CTCACGATCG TCAACGACCA CGAGCCGAAG
CCGCTGTACT ACGAGATGGC AGCCGAGGTC CCCACCTTCG ACGAGGAGGC CTACGAAGTC
CGTCAGGACG CACCCGACGA GTTCGTCGCG GAGTTCCCGA AAAGCGAGGA GTGA
 
Protein sequence
MPRLDVREIS PVNRHEKIHE EFEGMDPGET LTIVNDHEPK PLYYEMAAEV PTFDEEAYEV 
RQDAPDEFVA EFPKSEE