Gene Hlac_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1549 
Symbol 
ID7401481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1571723 
End bp1572157 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content67% 
IMG OID643708616 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002566207 
Protein GI222479970 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGA CCGACTCCCG ACCGAAACAC CCCACAGAGG TGAGTGACGT GCCTGCAACC 
GACTTCGACG CCGAGCGGAG CTACGACGAC GAGCGGTTCT CGACCAGCGA GGTGTTTCAC
AGCGATCGGA TGAAGATCGT CTGTGGCTAC TTCGAGCCGG GACAGTTCAT TCCCGTTCAC
GCGCCCGACA GCGACGTGGC GATCATCGTT CGCTCCGGCT CCGGCGTCGT TCGAGAGGGC
GAGACGGATC GGTCGGTCGG ACCCGGTGAT GTCGTCGTCG TGCCCGCCGG AACCGCGCGT
GGCGTGCGGG CGAGCGACGA GGAGCGACTT GAAGCGACAC TCGTCACCGC GCCGCAGCCG
ACGGACGCCG AACACGACCC GGTTCGGGAG GGAATCCGAC GCGGGGAGTT CGATTCGCGG
ACCGACGCGG AGTAG
 
Protein sequence
MAWTDSRPKH PTEVSDVPAT DFDAERSYDD ERFSTSEVFH SDRMKIVCGY FEPGQFIPVH 
APDSDVAIIV RSGSGVVREG ETDRSVGPGD VVVVPAGTAR GVRASDEERL EATLVTAPQP
TDAEHDPVRE GIRRGEFDSR TDAE