| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1536 |
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| Symbol | |
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| ID | 7401466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1557347 |
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| End bp | 1559095 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643708602 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_002566194 |
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| Protein GI | 222479957 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGG ACGAGTCCCA GAGCGGTACG GATCCGAGCG CGGTCGACGC TCCGACCGTC
GCCGAGGCGG TCGTCGACTG CATGCTCGAC CGCGGGATCG ACGTCGCCTT CGGGATCCCC
GGCAAGCAGA CGCTCCCGCT GAATCGGGCG CTCGGCGAGC GCGACGCCCG GTTTGTCGTC
GCGCGCCACG AGACGGCCGT GACTCATCAG GCGTGGGGAT ACGCTGAGAC GAGCGATCCC
GGAGCGATGG CGGCGTCGAT CGTCGTCCCC GGCCCCGGCG ATATGAACGC GATGAACGGG
CTGAAAAACG CCCTGAACGA CTGCGTCCCT CTCCTCCACC TCGCGGTCGA GACCGAACGA
GAGGTCCGCG GCGGCGACGG GATCCACGAG ACGCCGCCCG AGACGTACGA CACGGTCGTC
AAGGAGAACG TCCTCGTCGA CTCGCCGGCC GGTGCGGTCC CCGCCGTCGC CGAGGCGATC
CGGGTCGCCC GCGAGCACCC GCAGGGACCC GTCCGCGTCG GGATCCCAAA AGATGTACTC
GCGAGCCGGA CGCCCCAGCC GGCGATCGGG GACCGAGAGC CGGCCGCGCC GCCGGACCCG
CCCGCGGACG CGGTCGATCG CGCGGCCGAC CTCCTCGCTG GAGCCGGTTC GCCGGTGATT
CTCGCGGGCG GCGGCGTCCG GCGCGCGGGC GCGAGCGACT CGCTCCGCGC GATCGCCGAG
CGCCTCGACG CCCCGGTCGT CACGACTTAT AAAGGAAAGG GGACGCTTCC CGAGACGCAC
CCCCTCTCCG CGGGCGTGCT CTGTGGCGGA TCGAGCACGG AGCTCCGCGA TCTCCTCGCC
GACGCGGACC GCGGGCTCGT CGTCGGCTCC GACCTCGACG CGGTCGCGAC CGCCTCCTGG
TCGGTGTCGC TGCCTGATTC CCTGATTCAC GTCACGCTCG ACGGCGACGA TATCGGCTTC
GGCTACGAGG CAGATCTCGG GATCGTCGCG GACGCTGACC GATTCCTGCA GGCGCTCGGG
GACCGGCTGG GAGACGAGGA GGAGGAGATG TTGGCCAGTG AGCCGGCGGG CTCGGCTTCG
CATCCTGAGT CGCCCGGCGC CGCCCGTGCC GACGCGGTCC GGTCCGCAGA CCGAGAGCGA
TTCGCCGCGC TCGCTGACGA GCGCAGCGCC AACGATCCCC TCCGTTCCGT CGAGGTCCTC
CGCGAGGTCC GCGAAGCGCT CCCAGCAGAG GCGGTCGTCA CCGCGGACGC CGGCGGGTTC
CGGCTGTGGA CGCTCGTCTC GTTCCCCGCG GCTGGCCCCT CGCGGTACGT GAATCCGGGA
TCGTGGGCGA CGATGGGGAC CGGGCTCCCG TCGGCGATCG GCGCCAAACT CGCGAACCCC
GACCGCGACG TGGTCGCCCT CACCGGTGAC GGCGGCCTCA TGATGTGCGT TCACGAGTTG
CACACGCTGG CCGCGGAGGG GATCGACGTG ACCGTCGTCG CGTTCACCAA CGACGACTAC
GCGATTATCA GCGAGGAGGC GTCGCGGTCG TACGACCTCC CGGCGGGCGC GTACGGCTGG
GCGGAGACCG CGATCGACCT CGTCGCCGTC GCATCCGGGA TGGGCGTCCG CGCCGAGCGG
GTGACCGATC GAGACGCGGT CGGCGAGGCC CTCACATCGG CGCTGGCCCA CGACGGACCG
GCTCTGATCG AGGTCGCCAC CGATCCGGAC GAGCCACAGG CGAGCGAGTG GATGACGCGG
GAACGCTGA
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| Protein sequence | MDTDESQSGT DPSAVDAPTV AEAVVDCMLD RGIDVAFGIP GKQTLPLNRA LGERDARFVV
ARHETAVTHQ AWGYAETSDP GAMAASIVVP GPGDMNAMNG LKNALNDCVP LLHLAVETER
EVRGGDGIHE TPPETYDTVV KENVLVDSPA GAVPAVAEAI RVAREHPQGP VRVGIPKDVL
ASRTPQPAIG DREPAAPPDP PADAVDRAAD LLAGAGSPVI LAGGGVRRAG ASDSLRAIAE
RLDAPVVTTY KGKGTLPETH PLSAGVLCGG SSTELRDLLA DADRGLVVGS DLDAVATASW
SVSLPDSLIH VTLDGDDIGF GYEADLGIVA DADRFLQALG DRLGDEEEEM LASEPAGSAS
HPESPGAARA DAVRSADRER FAALADERSA NDPLRSVEVL REVREALPAE AVVTADAGGF
RLWTLVSFPA AGPSRYVNPG SWATMGTGLP SAIGAKLANP DRDVVALTGD GGLMMCVHEL
HTLAAEGIDV TVVAFTNDDY AIISEEASRS YDLPAGAYGW AETAIDLVAV ASGMGVRAER
VTDRDAVGEA LTSALAHDGP ALIEVATDPD EPQASEWMTR ER
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