| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1530 |
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| Symbol | |
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| ID | 7401460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1550127 |
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| End bp | 1551245 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708596 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002566188 |
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| Protein GI | 222479951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.421553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGACA GCGGGTTGGC TATGGCACGG CCCGAGGCCC TCGTCTCGAT CGGGGGGCGG
CTCACGCGTT TCGCAGACGT ACTCGGGGGG ATCGCGGGCT CCGCCCTCGG GGGAGTGCTG
CTCGTGGGCT TGTCGGTCGC GGTCGGCGTC CTCGTCTCGA AGTTCCTCGT GCGGCTCATC
GGCCGACCCG TCGCCCGGCG GGTGTCGAGA CAAAGCGTCG CGCAGACGAT CGTCAGGGGG
GTCCGCGTCG GGACGATCAC GCTCTCGCTG CTCGTCGGTC TCTGGGCGAT CGGGTTCCGC
TTTACCGACC TCCTCGTGGG GACCGCCGTC TTCTCCGCCG TGATCGGGAT CATCCTCGCG
CCGCTCGTCG GGAACTTCAT CAACGGCGTG TTCATCCTCG CGGACCAGCC GTTCGAAATC
GGCGACATGA TCGAGTTAGA GAACGGGACA ACCGGGTTCG TCGAGGACAT CACGATCCGG
TACACGAAGA TATTCACGCT CGACAATACC TTCCTCGTCG TGCCGAACGG GACGATGCGC
GAGCGCGACG TGACCAACTA CTCCGCCGAG GACGAGCGGA CCCGGCGGAC GATCGAGGTG
CTCGTCACCT ACGAGAGCGA CGTCTCCGAG GCCCGACGGC TCATCGAGCG GGCGGCCCGC
GACTGCGACG CGGTGATCGA CGGCGGGCCC GACATCCGGG TCGGGGTCGC GCGCTACGTC
GCCAGCCCGG ACTGCCGGCT CCACGAGTTC GGGGACGATG GCGTGCTCCT TCGCCTCCGG
TACTGGGTGA AGAAGCCGTA CAAGCTCGCG AAGGTGCAGT CTGACGTGAA CACCCGAATC
CGTGAGCGGG TCACGGACGC CGACGTTGAG ATGGCGTATC CGCACCGACA CCTCGTCTTC
GACGACACCT CCGGGATCGC GCGTGTGGGC GGCCCAGAAT CGGGTCGTCC GGCAGGCGAG
CGCGCCGGCG ACAAGCCCGG CTCGGAGGGC CGTGGCGGAA ATGGATCTCC GGACGGAGCC
GCGGAAGCAA CACTGACCGA CAGTGAGCCA TCGACGGGAG CGGACGCCGC TGCCCAGACC
GACCTTAGCG GCGGAGACGA GTCGGGCGAT AATCGGTGA
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| Protein sequence | MGDSGLAMAR PEALVSIGGR LTRFADVLGG IAGSALGGVL LVGLSVAVGV LVSKFLVRLI
GRPVARRVSR QSVAQTIVRG VRVGTITLSL LVGLWAIGFR FTDLLVGTAV FSAVIGIILA
PLVGNFINGV FILADQPFEI GDMIELENGT TGFVEDITIR YTKIFTLDNT FLVVPNGTMR
ERDVTNYSAE DERTRRTIEV LVTYESDVSE ARRLIERAAR DCDAVIDGGP DIRVGVARYV
ASPDCRLHEF GDDGVLLRLR YWVKKPYKLA KVQSDVNTRI RERVTDADVE MAYPHRHLVF
DDTSGIARVG GPESGRPAGE RAGDKPGSEG RGGNGSPDGA AEATLTDSEP STGADAAAQT
DLSGGDESGD NR
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