Gene Hlac_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1526 
Symbol 
ID7401456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1545968 
End bp1547065 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content67% 
IMG OID643708592 
Producthypothetical protein 
Protein accessionYP_002566184 
Protein GI222479947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.978056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.147398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGC ACGCCGTCGA CGCGGTAGAC GACGCCGTCG AGGCCACTCG TCGATTCCTG 
TTCCCGTTTA GCCTGGTTCG CTGGGCAAAG CTCGCTTTCC TCGTCCTCCT GATGGGCGGA
AGCGCGAACG CCGGCGTGTC GATTCCCGCC GCTCCCGACG CCCGAATTGC GGGATTCGCG
GGGGTCTCTG AGGTCTGGGA ATCTGATACG GGAGCGATGA CTCCGTCTGA GGCCGTCGAC
GCCGTCGTTT CGGACCTCGT CCCCGGTATG CCGGCCGATC GGCTGATCGT CGCCGTCGCG
ATCGCGACCG TCGTCGCCGC GGTCGCGTTC TCGGTGGTCT CGCTGTCGCT TCGGCTGGTC
TTTTACGACG CGCTCCGGAC GAACGAGGTC CGGCTGTGGC GGCCGTTCCT CGGTCACCTC
CGGCAGGCGG CCGGGCTGTT CGTCGCCTCC GCGGCCCTCT GGTCGATCGC CGTCGGACCG
ATCGCGTTGG CCGCGCTCGT CGGCGTCGCG GCAGAGGCGC CGCTCGGATG GGAACCGATC
GACTCGTTGG CGGCGGCGGT CGGATCGCTT TCGCTCGGCC CCGCAATCGT CGTAGGGCTC
CTCGGGAGCG CGGTCGTCCT GTTCGCGACG CTCGCGCTCC GGCTCACCTA CGAGTTCGTT
GTCCCGGCGA TGATCGTCGA GGATATCGGC GTGCTCGCTG GCTGGCGCCG GACCTGGGAC
GCGGTGAGCG GAGAGTGGCC GCAGGTACTC GTCTACCTCG CGGTTCACTT CTTCGTCCGT
CTCGGAACCG CGATCGTCGA GGGGATCGCG TTCGTGATCG CCGGCTCGGC CGTCGCCGGG
ATCGCCGGGA TCGCACTTCT ACTTGCGGCC GTTCTCCTCG GTGGTCTCGG CGCGTTAGTG
AGCACGACCG CCGGAACTGT GACGGTTGTG TTGGTCGTGC TCGTCGCCGT GGTAACGCTG
CTGGCGGTGA CGCTCCCCAT CAGCCTCGTT ACCAGGTCGT ACCTGATTTC GTACGAAGTC
GCCACGCTCG GCGGGATTGA TTCGGGATTA GCGCTGCTGC ATCCGGATAT CCATCCGAAA
TTCACCGACC GCGATTGA
 
Protein sequence
MSWHAVDAVD DAVEATRRFL FPFSLVRWAK LAFLVLLMGG SANAGVSIPA APDARIAGFA 
GVSEVWESDT GAMTPSEAVD AVVSDLVPGM PADRLIVAVA IATVVAAVAF SVVSLSLRLV
FYDALRTNEV RLWRPFLGHL RQAAGLFVAS AALWSIAVGP IALAALVGVA AEAPLGWEPI
DSLAAAVGSL SLGPAIVVGL LGSAVVLFAT LALRLTYEFV VPAMIVEDIG VLAGWRRTWD
AVSGEWPQVL VYLAVHFFVR LGTAIVEGIA FVIAGSAVAG IAGIALLLAA VLLGGLGALV
STTAGTVTVV LVVLVAVVTL LAVTLPISLV TRSYLISYEV ATLGGIDSGL ALLHPDIHPK
FTDRD