Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1518 |
Symbol | |
ID | 7401444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1530213 |
End bp | 1530710 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643708580 |
Product | cyclase/dehydrase |
Protein accession | YP_002566176 |
Protein GI | 222479939 |
COG category | [S] Function unknown |
COG ID | [COG4276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00883891 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGACGT ATCGACGGAC GACCCGCGTT CCGGCCCCCA TCGACGAGGT GTGGGCGTTT CACTCCACGA TTGACGGGCT TCGCGAGCTC ACGCCCGATT GGATGCACCT CCAAATTGCG GGCGTCGAAG GGCCAGACGG AGAGCCGGAT CCGGATGTGC TCACCGAGGG CTCACAGATC CGGATGTCCA TACGACCGTT TGGCGTCGGG CCGCGACAGC GGTGGACCTC CCGGATCACC GAGCGAGACC CTCACGACGA GACCGCGCTC GGCGATCGCG CGCACTTTAT CGATGAGATG GTTGGCGGCC CGTTCCGAAC GTGGGAGCAC ACGCACGCGT TCTACGCCGA CGTGGAGGAG ACGCTCTTGG TCGACACCGT CGCGTACCGA CTCCCATTCG GTCCGCTCGG GGACGCAGCC GGCCCGTTTG CGAAGGTCGG GTTCGAAGGG ATGTTTCAGG ACCGACATCG GCGGACAATC TCCCGGTTCG AGTCGTAG
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Protein sequence | MPTYRRTTRV PAPIDEVWAF HSTIDGLREL TPDWMHLQIA GVEGPDGEPD PDVLTEGSQI RMSIRPFGVG PRQRWTSRIT ERDPHDETAL GDRAHFIDEM VGGPFRTWEH THAFYADVEE TLLVDTVAYR LPFGPLGDAA GPFAKVGFEG MFQDRHRRTI SRFES
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