Gene Hlac_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1518 
Symbol 
ID7401444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1530213 
End bp1530710 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID643708580 
Productcyclase/dehydrase 
Protein accessionYP_002566176 
Protein GI222479939 
COG category[S] Function unknown 
COG ID[COG4276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00883891 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGACGT ATCGACGGAC GACCCGCGTT CCGGCCCCCA TCGACGAGGT GTGGGCGTTT 
CACTCCACGA TTGACGGGCT TCGCGAGCTC ACGCCCGATT GGATGCACCT CCAAATTGCG
GGCGTCGAAG GGCCAGACGG AGAGCCGGAT CCGGATGTGC TCACCGAGGG CTCACAGATC
CGGATGTCCA TACGACCGTT TGGCGTCGGG CCGCGACAGC GGTGGACCTC CCGGATCACC
GAGCGAGACC CTCACGACGA GACCGCGCTC GGCGATCGCG CGCACTTTAT CGATGAGATG
GTTGGCGGCC CGTTCCGAAC GTGGGAGCAC ACGCACGCGT TCTACGCCGA CGTGGAGGAG
ACGCTCTTGG TCGACACCGT CGCGTACCGA CTCCCATTCG GTCCGCTCGG GGACGCAGCC
GGCCCGTTTG CGAAGGTCGG GTTCGAAGGG ATGTTTCAGG ACCGACATCG GCGGACAATC
TCCCGGTTCG AGTCGTAG
 
Protein sequence
MPTYRRTTRV PAPIDEVWAF HSTIDGLREL TPDWMHLQIA GVEGPDGEPD PDVLTEGSQI 
RMSIRPFGVG PRQRWTSRIT ERDPHDETAL GDRAHFIDEM VGGPFRTWEH THAFYADVEE
TLLVDTVAYR LPFGPLGDAA GPFAKVGFEG MFQDRHRRTI SRFES