| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1504 |
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| Symbol | |
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| ID | 7400332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1515522 |
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| End bp | 1517708 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708566 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002566162 |
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| Protein GI | 222479925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.496352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCATC CCGGACCCCC GCGATTCCTC GCGACCGGCG AGACCACGGA GCTTGCACCG
CGAGATCCGG ACCCGAACGG ATCCTACGAG TGGCGCGTTG TCGACGCGCC GCCAGACAGT
GAAGCGACGG TCGGAACCGA CCCGGTGACC GAGTTCACCC CAGACGTACC CGGACGCTAC
TGGATCGGGC TCGACGCCCC CGACGGTGAT CACCGGCTGA CGGTCCACGC GTTCCCGTCG
AGCTACGAGG GTGTCGACGT CGAGGGCGGA AGCGGGACGG AGATCCGCGA CCGCACCGCT
GGCAACGCCC CGGTCGACTA CGCCGAGCCC CGCGGCGATG GGGGCGTGGG GCGGCCGCGA
ATGCGTCTGG ACGCGAGCGT GGAGTTAGGG GAGACCGACG GGGACGAGGA GGGCGGTGAC
GAGAAGGGCA GCGACGAGAA GAGCAGCGAC GAGAAGAGCA GCGACGGGAC TGGCAAGCCC
GAAATCGTCG TCCGAGCGAC ACCGACACCG AATCCCCATT CCTCGCTCGG CGCGGGCGAC
CTACGAGTGA CGTTCATCGT CGACGACCGC GACGTCGAGA GCGCGGTCGC AGAGGGGCGG
AGGAACCCAC GTGACGCGCT CCGGACGAGC GACGACGGGC GGGAGCTTCG CGTGCCCGCG
GCCGCGGTCG CGGATCGACT TCGGGTCCAC GGGGTCGCGG TCGCGGCGGA GCCGGGGCAG
GAGCCGCGGG TTAGCGTCGC CGACGCGGTC GCGGTCGATC GAAGCGACGG CGGCGTGGGC
AGGCACGACG AGGGCGACAA AACGAGCGAT CGGAACAACG GCGATGACGG ACGCATCGGC
GGCCCGACAC GCCCCGCCTT CGAGACGGTT CGGCTTAACG ACCCGCCGAC GTGGACGCAC
GACGCAACCG TCTACGAGGT GTACGTCCGG ACGTTCGCCG ACGAGGGGAA AGGGGAGACG
TTCGGCTCGA TCGCCGACCG GATCCCGGCG ATTGCGGAAC TCGGCGTCGA CACGCTGTGG
CTCACGCCGG TCCTCCAGCA CGACGGGAAG CCGCACGGCT ACAACATCAC CGACTTCTTC
GACGTGGCCG AGGACCTCGG CGAGCGCGAC GACTACGAGG CGCTGGTCGA GACGGCCCAC
GACCACGGGA TGCGGGTGCT GTTCGACTTC GTCGCCAATC ACACCGCGCG CGACCACGAG
TGGTTCGAGG ACGCCTACCA GAATCCGGAC TCCCCGTACC GCGACCGCTA CGAGTGGCAA
GAGTCGGGCG AGCCGGGGAC GTACTTCGAC TGGGAGCTGA TCGCGAACCT GAACCACTCG
AACCTCGAGG TTCGGCGATT CCTCCTCGAC GTGGTCGACG AGTGGGCCCC GCTCGTGGAC
GGATTCCGGT GCGACATGGC GTGGGCCGTG CCGGACTCCT TCTGGCGCGA GCTTCGCGAC
CGGGTGAAGG ACATCGACCG GGAGTTCCTG TTGATGGACG AGACGATTCC GTACATCCCC
GGCTTCCACG AGGGGATGTT CGACGTTCAC TTCGACGCGA CGCTGTACTT CCAGCTCCGC
CAGATCGGCC GGGGCGTCGA CCCCGCCATG TCGCTTTTGG ACGCGATCGA CCAGCGCGCC
GAGATCGGCT TCCCGGACCA CGCCGAGTTC CTCCAGTACA TTGAGAATCA CGACGAGACG
CGCTACCGCG TCGAGTGCGG CGACGCCGCC GCGGCCGCGG CGGGGGCGGC GATATTCACG
TTGCCCGGCG TGCCGATGAT CTACGCCGGT CAGGAGATCG GCCAGCGCGG CCGGCGCGAC
GCGATCGCGT GGGATCACGC CCGCGAAGGA GTCCGCGACC GCTACGAGCG GCTGATCGCG
GTTCGCGAGG CTCACCCGGC GCTCGGACCC GAGGGCGACC TCGACCGAGT AGGGTACCAC
GTCGCCAGCG GTGACGTCTC GGAGCGACCG ATCGTCGCCA GCGGCGACGT TCACCCCGAC
GACGTGGTGG CGTTCCGTCG GAGCGACGAG GACGAAGAGC TCGTCGTCGT CCTCAACTTC
GCACCCGAAC CCGCGAGCGT CTCGGTCGGC GTCGACCACG CCGATCGGGA CCTCGTGTCG
GGCGATCCCT GCGTGGTTGT CGACGGCGAT GGGACCGAAC GAATTCGCGT CGACGACGTG
GCGGTCGCCC GGGTCGAGGG GCGCTGA
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| Protein sequence | MHHPGPPRFL ATGETTELAP RDPDPNGSYE WRVVDAPPDS EATVGTDPVT EFTPDVPGRY
WIGLDAPDGD HRLTVHAFPS SYEGVDVEGG SGTEIRDRTA GNAPVDYAEP RGDGGVGRPR
MRLDASVELG ETDGDEEGGD EKGSDEKSSD EKSSDGTGKP EIVVRATPTP NPHSSLGAGD
LRVTFIVDDR DVESAVAEGR RNPRDALRTS DDGRELRVPA AAVADRLRVH GVAVAAEPGQ
EPRVSVADAV AVDRSDGGVG RHDEGDKTSD RNNGDDGRIG GPTRPAFETV RLNDPPTWTH
DATVYEVYVR TFADEGKGET FGSIADRIPA IAELGVDTLW LTPVLQHDGK PHGYNITDFF
DVAEDLGERD DYEALVETAH DHGMRVLFDF VANHTARDHE WFEDAYQNPD SPYRDRYEWQ
ESGEPGTYFD WELIANLNHS NLEVRRFLLD VVDEWAPLVD GFRCDMAWAV PDSFWRELRD
RVKDIDREFL LMDETIPYIP GFHEGMFDVH FDATLYFQLR QIGRGVDPAM SLLDAIDQRA
EIGFPDHAEF LQYIENHDET RYRVECGDAA AAAAGAAIFT LPGVPMIYAG QEIGQRGRRD
AIAWDHAREG VRDRYERLIA VREAHPALGP EGDLDRVGYH VASGDVSERP IVASGDVHPD
DVVAFRRSDE DEELVVVLNF APEPASVSVG VDHADRDLVS GDPCVVVDGD GTERIRVDDV
AVARVEGR
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