| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1501 |
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| Symbol | |
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| ID | 7400329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1508221 |
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| End bp | 1510077 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708563 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_002566159 |
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| Protein GI | 222479922 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGG AGGACTACTG GGGGATCGGC CCGAAGACGA GCGAGCGGCT CACGGAGTCG
CTCGGGACCG AGCGGGCGAT CGAGGCGATC GAGGCGGCCG ACGTCCGGGC GCTCGTCGAC
GCCGGGCTCC ACCGCGGGCG AGCCACCCGG ATCCTCCGCC GCGCGAACGG CGAGGCCGGC
ATGGGTGTCC TCGCGACTGG CGACGCACGC TCGGTGTACG ACGACCTCCT CACGGTAGCG
GCCGGCCACG CGCTGACGGA CCACGCCGCC GACCGAATCC GGGTGTTGAC GCCCCTCACC
GAGCGGAGCG CGATTGAGTC GCGGCTCGAT GAGGTGGTCG CCGCTCGCGA CGCGTGGGCA
GCACTCGACG ACGGCGAGCG CGACCGCGTC GTCGCCGCGT TCGACGACTA CGACGCGGCC
GAGGGCTCCG ATCTGGCGGC CGTCGAGACC GCGGTCGCGC TGCGCGATGT GGGTCTCACG
GAGACGCCCT TCGAGGATAT CGGGGCGCTG GATGGCGACA GCCTGCGCGA CGCCGCCGAC
GCCCTCGCCG ACGTGCGGGG TGCGATCGAC CCGACGGGCG TCGACGGCGA CGGCGAGATC
GAGGTCGCGC GCGGTGCGGA CGACGAGCTT GACCGCCTGC GTGAGCAGTT CGACGCGGCG
GAGGAGCTGG CGAACTCCGC GTTCGACGTG CTTGATACGG TTCGGGACGG CTCCCTGCGC
GACTTCGAGG CGCTGGAGGC AGCGACGATC GACCACGTCG CTCGCGAGAC CGGCGTCGAT
CCGGCGACGG TGCGCTCGGT CGCGCCGGAC GACGCGATCG ACGCCGCCGA CTTCGTCTCC
GCCACGCTCC GCGATCTGGT GACGGAACTG GAGGCGGCGG TCGCGGAGCG CGAGGAGACC
GTCGCGGCCG ACATCCGCGA GCGGATCGGC GGGATGCGAG TTGGGGATGA GGGAGACAAA
GGTGAGAAAG ATGACGAAGC TGACGAAGCG GCGACCGGAA CCGTCGCCGG CGCGGTCGCG
GCCGTCTCCG ACGCCGCGTT CCTGCTGTCG CTCGCGCGGT TCGCGGTCGC GTACGATCTG
ACTCGACCGA CCCTCGTCGA CGACGGCGTC GCGGTGCGAA ACGCTCGCAA CCTCTTCATC
GACGGCGAGG TCCAGCCGGT GTCGTACGCG ATCGGCTCAC ACTCGCTTGC GGGCGAACCC
GGCGTCGCGA GCGTCGACGC GCCGCCGACC GGCGACCGCG TGAGCGTCCT CACGGGGGCG
AACTCGGGCG GGAAAACCAC CCTGTTGGAG ACGCTGTGTG CGGTGGCACT GCTGGCGTCG
ATGGGGCTTC CGGTGCCGGC CGAGGAGGCG GAGGTCGGTG CGTTCGATCG GATCGTGTTC
CACCGACGGC ACGCCTCCTT CAACGCCGGT GTGTTGGAGT CGACGCTGAA GTCGGTCGTC
CCGCCGCTGG TCGAGGACGG GCGGACGCTG ATGCTCGTCG ACGAGTTCGA GGCGATCACG
GAGCCGGGCC GAGCCGCCAA CCTGCTGAAC GGGCTCGTGA CGCTCACCGT GGACCGCGGC
GCCCTCGGCG TGTACGTCAC GCACCTCGCG GAGGACTTGA GCCCGCTGCC CGAGGCCGCC
CGGATCGACG GTATCTTCGC CGAGGGACTC ACGAACGACT TGGACCTCCG CGTCGACTAC
CAGCCGCGGT TCGGTACCGT CGGGAAGTCG ACGCCGGAGT TCATCGTCTC GCGGCTCGTG
GCGAACGCGA AAGACCGCGG CGTCCGCGCC GGGTTCGAGC ACCTCGCCGG CGCGGTCGGC
GAAGAGGCGG TCCAGCGCAC CCTCTCGGAC GTGGAGTGGT CGGAAGGCGA TGACTGA
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| Protein sequence | MRLEDYWGIG PKTSERLTES LGTERAIEAI EAADVRALVD AGLHRGRATR ILRRANGEAG
MGVLATGDAR SVYDDLLTVA AGHALTDHAA DRIRVLTPLT ERSAIESRLD EVVAARDAWA
ALDDGERDRV VAAFDDYDAA EGSDLAAVET AVALRDVGLT ETPFEDIGAL DGDSLRDAAD
ALADVRGAID PTGVDGDGEI EVARGADDEL DRLREQFDAA EELANSAFDV LDTVRDGSLR
DFEALEAATI DHVARETGVD PATVRSVAPD DAIDAADFVS ATLRDLVTEL EAAVAEREET
VAADIRERIG GMRVGDEGDK GEKDDEADEA ATGTVAGAVA AVSDAAFLLS LARFAVAYDL
TRPTLVDDGV AVRNARNLFI DGEVQPVSYA IGSHSLAGEP GVASVDAPPT GDRVSVLTGA
NSGGKTTLLE TLCAVALLAS MGLPVPAEEA EVGAFDRIVF HRRHASFNAG VLESTLKSVV
PPLVEDGRTL MLVDEFEAIT EPGRAANLLN GLVTLTVDRG ALGVYVTHLA EDLSPLPEAA
RIDGIFAEGL TNDLDLRVDY QPRFGTVGKS TPEFIVSRLV ANAKDRGVRA GFEHLAGAVG
EEAVQRTLSD VEWSEGDD
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