Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1455 |
Symbol | |
ID | 7400282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1462308 |
End bp | 1463492 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708516 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002566113 |
Protein GI | 222479876 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCACGGA GCCGGCTGTT TGGATCACTG TGTGCGATCG TCTTTCTCGT CAACTTCGCG CGGGTGGTGT TCGCGCCGCT CATCGGCGAG TTCATCAGCG AGTTCGCGAT CGGCGAGGGG ACGGCGGGAC TGATCGTCAC GCTCGCGTGG CTCGGCTCGG CCGCGCCGCG GCTCCCGGCG GGCTGGGCGC TCACGCGCTT CTCCCGGCAG TACGTGGTTC TCGTCTCCGG AGCGATGCTG ACAGTCGGTG CGCTCGGCGT CGCGCTGGCG CCGGGCGTCC CGACGCTGAT GGCCGCCGCG TTCGCGATCG GCTTGGCGTC CGGCGTCTAC TTCGTCGCCG CCAACCCGTT CATCGCGGAG CTGTTCCCGA CTCGGGTCGG GCGCGTGATG GGTGTCCACG GAATGGCGAG CCAGCTCGCC GCAGTCGCCG CCGCGCCGGT CGTCACGGTC GCGCTCTGGT ACGACTGGCG GCTCGCCTTC TACGGGCTCG CGCTCGCCTC GGCCGCCTCC ACCGTCGTCT TCGTCGCCTT GGCCCGCCGG ACGGACCTCC CGGACGCAGG CGCGGGCGAC ACCGATTTCC TCGCCGGCGC GCTCTCGGAG TGGAAGCTGA TTCTGGCGGG CGTCGTGTTG ATGGGACTCA CGAGCTTCGT TTGGCAAGGA CTCTTCAACT TCTACGAGCT GTACATGGTC GATAAGGGGC TCCCGCCCGC GGCGGCGCGG AACCTGCTGA CGGTGATCTT CGCCGCGGGC GTCCCGGCGT TTCTCATCTC CGGCGACCTC GCCGACCGGC TCCCGCACGT CCCATACCTA CTCGGGATCG TGTCTGTGTT CCTCGTCGGC GTCGTCCTCG TGGTCGTTTC CTCGGGGCTG GCCGCTGTCG TCGCCGCGAG CGTCGTCGTC GGCTTCGCCA TCCACATGCT GTTTCCCGCC GGCGACACCT ACCTGCTCGC GTCGCTGCCG GACGGGTCCC GAGCGTCGGC GTACGCCGTC TTCTCCGCCG GGATGATGAC GACGCAGGCG GCCGGCTCGT GGGTCGTCGG CGAGGCGATA GAGGCCGGCG CCGGCTACGA CGCGGTTTTT CTCTCCCTCG CCGGGGGACT CGCCCTCGTC GTCGTCGCCT ACGCGGTGCT TGAGTACGCC GGGCGCGTTC CGGGCGGCGC CGCGGGCACG GAGCACGCGG CCTGA
|
Protein sequence | MSRSRLFGSL CAIVFLVNFA RVVFAPLIGE FISEFAIGEG TAGLIVTLAW LGSAAPRLPA GWALTRFSRQ YVVLVSGAML TVGALGVALA PGVPTLMAAA FAIGLASGVY FVAANPFIAE LFPTRVGRVM GVHGMASQLA AVAAAPVVTV ALWYDWRLAF YGLALASAAS TVVFVALARR TDLPDAGAGD TDFLAGALSE WKLILAGVVL MGLTSFVWQG LFNFYELYMV DKGLPPAAAR NLLTVIFAAG VPAFLISGDL ADRLPHVPYL LGIVSVFLVG VVLVVVSSGL AAVVAASVVV GFAIHMLFPA GDTYLLASLP DGSRASAYAV FSAGMMTTQA AGSWVVGEAI EAGAGYDAVF LSLAGGLALV VVAYAVLEYA GRVPGGAAGT EHAA
|
| |