| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1444 |
|---|
| Symbol | |
|---|
| ID | 7400271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1454389 |
|---|
| End bp | 1455366 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643708505 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566102 |
|---|
| Protein GI | 222479865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTG AAATTCGAAC TGAGAGTTCC GTATACGAGA AAACCACCTG GGAACGTGTG
GTCGAGTGGG TGCTTATGGA GGGTGATCGA CGTGTTGTCG CGAGCGGCAT CACCGTGAGT
ATCGTCGGAA TCATTGGAGC GCTAATCTGG GGCGATATGC TCGCTGTGGG GCCAGACAGC
GCTGTCGACT CGCTCTTTTC GAGTGGTCTT ACCGCCGGTG TCATAACGCT AATTACGATC
TCTCTTTCGA TAAATCAACT TGTCATCTCA CGTGTGTTTG GGACGGTTAA ATCGCTGACA
GATCGTCTCG ATGGCGCGCG GGAACTCCAT GAGGATGTCG CAACCCTCGC GGGACAGCCG
TCGAGTCCAA ACGACCCGTC TGCGTTTCTC TCACTCATCG CTCAGACGCT GAGTGAACGG
GTCGCAACCC TCCGTGCGAT GAACGAGTCC GGCGATTGGG ACCCGCCAAG TGAGGTGACG
AACGCGCTTC GCGACATCGG CGAGTACGGC GAAAACATCG ACTCGCATCT CGACGATAAC
ATCCAGGTCG ATTCCGTGCT CACCATCCTC CTGGGACCTG AATACGCCGT GAATCTGAAT
GCGATCCAAC ATCTACAGAA CGGATACGCC GAGTCGTTCT CGGAGGCTGT TCAGGCGGAG
TTGCAGGCGA TCGACGAGCT CCTCGAATCT ATCGCCATCG TCCGTCAGTT CTACAAGACG
ATCGCCCTCC AACAGGACTT TGCGGAACTC TCGCGGATGA TCGTCTACAC CGGACTGATC
GCGTTCGTCA CGACGATCGC AGTGACACTC ATCTACCGGG AAAATACCGT TTCGATTCCG
CCCTCAACGG TTCCCATCGT TGTCAGTCTG GGCATCGGCG TTGTCACCGT CCCACTGACG
CTTTTCGTGT CGTATATCCT CAGGGCAGCG ACGGTCGCCC GGAAAACCGT CTCGGTCGGT
CCCTTTATTC CTCCGTAA
|
|---|
| Protein sequence | MTPEIRTESS VYEKTTWERV VEWVLMEGDR RVVASGITVS IVGIIGALIW GDMLAVGPDS
AVDSLFSSGL TAGVITLITI SLSINQLVIS RVFGTVKSLT DRLDGARELH EDVATLAGQP
SSPNDPSAFL SLIAQTLSER VATLRAMNES GDWDPPSEVT NALRDIGEYG ENIDSHLDDN
IQVDSVLTIL LGPEYAVNLN AIQHLQNGYA ESFSEAVQAE LQAIDELLES IAIVRQFYKT
IALQQDFAEL SRMIVYTGLI AFVTTIAVTL IYRENTVSIP PSTVPIVVSL GIGVVTVPLT
LFVSYILRAA TVARKTVSVG PFIPP
|
|---|
| |